Gene : Glyma.05G113400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13832//PTHR13832:SF241 - PROTEIN PHOSPHATASE 2C Genomic Order:  1134
Name:  ? Glyma.05G113400 Secondary Identifier:  ? PAC:30525787
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G113400 0.5kb upstream 0.5kb upstream 5940 true Chr05: 30061094-30067033 Glycine max
Glyma.05G113400 0.5kb upstream 0.5kb upstream 500 false Chr05: 30066534-30067033 Glycine max
Glyma.05G113400 0.5kb downstream 0.5kb downstream 5940 true Chr05: 30060594-30066533 Glycine max
Glyma.05G113400 0.5kb downstream 0.5kb downstream 500 false Chr05: 30060594-30061093 Glycine max
Glyma.05G113400 1.0kb upstream 1.0kb upstream 6440 true Chr05: 30061094-30067533 Glycine max
Glyma.05G113400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 30066534-30067533 Glycine max
Glyma.05G113400 1.0kb downstream 1.0kb downstream 6440 true Chr05: 30060094-30066533 Glycine max
Glyma.05G113400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 30060094-30061093 Glycine max
Glyma.05G113400 2.0kb upstream 2.0kb upstream 7440 true Chr05: 30061094-30068533 Glycine max
Glyma.05G113400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 30066534-30068533 Glycine max
Glyma.05G113400 2.0kb downstream 2.0kb downstream 7440 true Chr05: 30059094-30066533 Glycine max
Glyma.05G113400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 30059094-30061093 Glycine max
Glyma.05G113400 5.0kb upstream 5.0kb upstream 10440 true Chr05: 30061094-30071533 Glycine max
Glyma.05G113400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 30066534-30071533 Glycine max
Glyma.05G113400 5.0kb downstream 5.0kb downstream 10440 true Chr05: 30056094-30066533 Glycine max
Glyma.05G113400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 30056094-30061093 Glycine max
Glyma.05G113400 10.0kb upstream 10.0kb upstream 15440 true Chr05: 30061094-30076533 Glycine max
Glyma.05G113400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 30066534-30076533 Glycine max
Glyma.05G113400 10.0kb downstream 10.0kb downstream 15440 true Chr05: 30051094-30066533 Glycine max
Glyma.05G113400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 30051094-30061093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122796170 5272 Eudicot View MSA
122310977 5265 Fabidae View MSA
124067755 5270 Rosid View MSA
123739663 5271 Pentapetalae View MSA
122050324 5273 Angiosperm View MSA
121349190 5274 Embryophyte View MSA
123381206 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.91679 0.0 5.78903   Low
cufflinks 3.68539 0.0 10.3117    
cufflinks 3.47141 0.0 9.78034    
cufflinks 5.00828 0.0 13.6506    
cufflinks 8.28219 0.0 22.1083    
cufflinks 12.6068 0.0 33.7897   High
cufflinks 15.3053 0.0 41.3555   High
cufflinks 4.16694 0.0 11.5093    
cufflinks 7.37891 0.0 19.7492    
cufflinks 2.524        
cufflinks 8.029     High  
cufflinks 2.876        
cufflinks 5.183        
cufflinks 2.478        
cufflinks 10.035     High High
cufflinks 1.489       Low
cufflinks 15.576     High High
cufflinks 2.128        
cufflinks 3.919        
cufflinks 1.529       Low
cufflinks 8.459     High  
cufflinks 2.001        
cufflinks 2.312        
cufflinks 5.074        
cufflinks 1.492       Low
cufflinks 14.555     High High

0 Strain