Gene : Glyma.05G106900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31311:SF3 - GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  1069
Name:  ? Glyma.05G106900 Secondary Identifier:  ? PAC:30523656
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G106900 0.5kb upstream 0.5kb upstream 1787 true Chr05: 28424006-28425792 Glycine max
Glyma.05G106900 0.5kb upstream 0.5kb upstream 500 false Chr05: 28424006-28424505 Glycine max
Glyma.05G106900 0.5kb downstream 0.5kb downstream 1787 true Chr05: 28424506-28426292 Glycine max
Glyma.05G106900 0.5kb downstream 0.5kb downstream 500 false Chr05: 28425793-28426292 Glycine max
Glyma.05G106900 1.0kb upstream 1.0kb upstream 2287 true Chr05: 28423506-28425792 Glycine max
Glyma.05G106900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 28423506-28424505 Glycine max
Glyma.05G106900 1.0kb downstream 1.0kb downstream 2287 true Chr05: 28424506-28426792 Glycine max
Glyma.05G106900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 28425793-28426792 Glycine max
Glyma.05G106900 2.0kb upstream 2.0kb upstream 3287 true Chr05: 28422506-28425792 Glycine max
Glyma.05G106900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 28422506-28424505 Glycine max
Glyma.05G106900 2.0kb downstream 2.0kb downstream 3287 true Chr05: 28424506-28427792 Glycine max
Glyma.05G106900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 28425793-28427792 Glycine max
Glyma.05G106900 5.0kb upstream 5.0kb upstream 6287 true Chr05: 28419506-28425792 Glycine max
Glyma.05G106900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 28419506-28424505 Glycine max
Glyma.05G106900 5.0kb downstream 5.0kb downstream 6287 true Chr05: 28424506-28430792 Glycine max
Glyma.05G106900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 28425793-28430792 Glycine max
Glyma.05G106900 10.0kb upstream 10.0kb upstream 11287 true Chr05: 28414506-28425792 Glycine max
Glyma.05G106900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 28414506-28424505 Glycine max
Glyma.05G106900 10.0kb downstream 10.0kb downstream 11287 true Chr05: 28424506-28435792 Glycine max
Glyma.05G106900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 28425793-28435792 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
122298258 5265 Fabidae View MSA
124070170 5270 Rosid View MSA
123745893 5271 Pentapetalae View MSA
122788546 5272 Eudicot View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0259755 0.0 0.11216 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.86946 0.0 9.27427   High
cufflinks 0.0158521 0.0 0.0717462 Low  
cufflinks 0.0477391 0.0 0.197613 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain