Gene : Glyma.05G108400 G. max Wm82.a2.v1
Genomic Order:  1084 Name:  ? Glyma.05G108400
Secondary Identifier:  ? PAC:30524112
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G108400 0.5kb upstream 0.5kb upstream 1463 true Chr05: 28727787-28729249 Glycine max
Glyma.05G108400 0.5kb upstream 0.5kb upstream 500 false Chr05: 28728750-28729249 Glycine max
Glyma.05G108400 0.5kb downstream 0.5kb downstream 1463 true Chr05: 28727287-28728749 Glycine max
Glyma.05G108400 0.5kb downstream 0.5kb downstream 500 false Chr05: 28727287-28727786 Glycine max
Glyma.05G108400 1.0kb upstream 1.0kb upstream 1963 true Chr05: 28727787-28729749 Glycine max
Glyma.05G108400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 28728750-28729749 Glycine max
Glyma.05G108400 1.0kb downstream 1.0kb downstream 1963 true Chr05: 28726787-28728749 Glycine max
Glyma.05G108400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 28726787-28727786 Glycine max
Glyma.05G108400 2.0kb upstream 2.0kb upstream 2963 true Chr05: 28727787-28730749 Glycine max
Glyma.05G108400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 28728750-28730749 Glycine max
Glyma.05G108400 2.0kb downstream 2.0kb downstream 2963 true Chr05: 28725787-28728749 Glycine max
Glyma.05G108400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 28725787-28727786 Glycine max
Glyma.05G108400 5.0kb upstream 5.0kb upstream 5963 true Chr05: 28727787-28733749 Glycine max
Glyma.05G108400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 28728750-28733749 Glycine max
Glyma.05G108400 5.0kb downstream 5.0kb downstream 5963 true Chr05: 28722787-28728749 Glycine max
Glyma.05G108400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 28722787-28727786 Glycine max
Glyma.05G108400 10.0kb upstream 10.0kb upstream 10963 true Chr05: 28727787-28738749 Glycine max
Glyma.05G108400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 28728750-28738749 Glycine max
Glyma.05G108400 10.0kb downstream 10.0kb downstream 10963 true Chr05: 28717787-28728749 Glycine max
Glyma.05G108400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 28717787-28727786 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302498 5265 Fabidae View MSA
124070215 5270 Rosid View MSA
123748040 5271 Pentapetalae View MSA
122795474 5272 Eudicot View MSA
122049581 5273 Angiosperm View MSA
121311486 5274 Embryophyte View MSA
123348778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5385 0.0 61.1226 High High
cufflinks 0.310529 0.0 1.21347    
cufflinks 0.24826 0.0 0.977164    
cufflinks 1.80906 0.0 6.4743    
cufflinks 0.662082 0.0 2.50836    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.21021E-4 0.0 0.00695282 Low Low
cufflinks 4.77052 0.0 15.4401    
cufflinks 0.937016 0.0 3.49056    
cufflinks 2.39        
cufflinks 0.216        
cufflinks 0.231        
cufflinks 0.035     Low Low
cufflinks 0.013     Low Low
cufflinks 0.157        
cufflinks 1.009        
cufflinks 7.65     High High
cufflinks 0.173        
cufflinks 0.612        
cufflinks 1.75        
cufflinks 0.229        
cufflinks 1.812        
cufflinks 2.322        
cufflinks 1.304        
cufflinks 1.096        
cufflinks 0.202        

0 Strain