Gene : Glyma.05G109200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10641//PTHR10641:SF565 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  1092
Name:  ? Glyma.05G109200 Secondary Identifier:  ? PAC:30526732
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G109200 0.5kb upstream 0.5kb upstream 2672 true Chr05: 28963565-28966236 Glycine max
Glyma.05G109200 0.5kb upstream 0.5kb upstream 500 false Chr05: 28965737-28966236 Glycine max
Glyma.05G109200 0.5kb downstream 0.5kb downstream 2672 true Chr05: 28963065-28965736 Glycine max
Glyma.05G109200 0.5kb downstream 0.5kb downstream 500 false Chr05: 28963065-28963564 Glycine max
Glyma.05G109200 1.0kb upstream 1.0kb upstream 3172 true Chr05: 28963565-28966736 Glycine max
Glyma.05G109200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 28965737-28966736 Glycine max
Glyma.05G109200 1.0kb downstream 1.0kb downstream 3172 true Chr05: 28962565-28965736 Glycine max
Glyma.05G109200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 28962565-28963564 Glycine max
Glyma.05G109200 2.0kb upstream 2.0kb upstream 4172 true Chr05: 28963565-28967736 Glycine max
Glyma.05G109200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 28965737-28967736 Glycine max
Glyma.05G109200 2.0kb downstream 2.0kb downstream 4172 true Chr05: 28961565-28965736 Glycine max
Glyma.05G109200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 28961565-28963564 Glycine max
Glyma.05G109200 5.0kb upstream 5.0kb upstream 7172 true Chr05: 28963565-28970736 Glycine max
Glyma.05G109200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 28965737-28970736 Glycine max
Glyma.05G109200 5.0kb downstream 5.0kb downstream 7172 true Chr05: 28958565-28965736 Glycine max
Glyma.05G109200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 28958565-28963564 Glycine max
Glyma.05G109200 10.0kb upstream 10.0kb upstream 12172 true Chr05: 28963565-28975736 Glycine max
Glyma.05G109200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 28965737-28975736 Glycine max
Glyma.05G109200 10.0kb downstream 10.0kb downstream 12172 true Chr05: 28953565-28965736 Glycine max
Glyma.05G109200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 28953565-28963564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313314 5265 Fabidae View MSA
124071714 5270 Rosid View MSA
123746695 5271 Pentapetalae View MSA
122790538 5272 Eudicot View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.089496 0.0 0.358281 Low  
cufflinks 0.882378 0.0 3.18785   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0781859 0.0 0.314204 Low  
cufflinks 0.517986 0.0 1.92941    
cufflinks 0.055314 0.0 0.226153 Low Low
cufflinks 0.355083 0.0 1.34618    
cufflinks 0.142787 0.0 0.561317 Low  
cufflinks 0.83571 0.0 3.02997   High
cufflinks 0.068     Low  
cufflinks 0.598        
cufflinks 0.058     Low  
cufflinks 0.387        
cufflinks 0.126        
cufflinks 0.259        
cufflinks 0.043     Low  
cufflinks 0.881       High
cufflinks 0.022     Low Low
cufflinks 0.041     Low  
cufflinks 0.041     Low  
cufflinks 0.823       High
cufflinks 0.059     Low  
cufflinks 0.07     Low  
cufflinks 1.714       High
cufflinks 0.02     Low Low
cufflinks 0.896       High

0 Strain