Gene : Glyma.05G109600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31062:SF48 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 6-RELATED Genomic Order:  1096
Name:  ? Glyma.05G109600 Secondary Identifier:  ? PAC:30525981
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G109600 0.5kb upstream 0.5kb upstream 2758 true Chr05: 29118132-29120889 Glycine max
Glyma.05G109600 0.5kb upstream 0.5kb upstream 500 false Chr05: 29120390-29120889 Glycine max
Glyma.05G109600 0.5kb downstream 0.5kb downstream 2758 true Chr05: 29117632-29120389 Glycine max
Glyma.05G109600 0.5kb downstream 0.5kb downstream 500 false Chr05: 29117632-29118131 Glycine max
Glyma.05G109600 1.0kb upstream 1.0kb upstream 3258 true Chr05: 29118132-29121389 Glycine max
Glyma.05G109600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29120390-29121389 Glycine max
Glyma.05G109600 1.0kb downstream 1.0kb downstream 3258 true Chr05: 29117132-29120389 Glycine max
Glyma.05G109600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29117132-29118131 Glycine max
Glyma.05G109600 2.0kb upstream 2.0kb upstream 4258 true Chr05: 29118132-29122389 Glycine max
Glyma.05G109600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29120390-29122389 Glycine max
Glyma.05G109600 2.0kb downstream 2.0kb downstream 4258 true Chr05: 29116132-29120389 Glycine max
Glyma.05G109600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29116132-29118131 Glycine max
Glyma.05G109600 5.0kb upstream 5.0kb upstream 7258 true Chr05: 29118132-29125389 Glycine max
Glyma.05G109600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29120390-29125389 Glycine max
Glyma.05G109600 5.0kb downstream 5.0kb downstream 7258 true Chr05: 29113132-29120389 Glycine max
Glyma.05G109600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29113132-29118131 Glycine max
Glyma.05G109600 10.0kb upstream 10.0kb upstream 12258 true Chr05: 29118132-29130389 Glycine max
Glyma.05G109600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29120390-29130389 Glycine max
Glyma.05G109600 10.0kb downstream 10.0kb downstream 12258 true Chr05: 29108132-29120389 Glycine max
Glyma.05G109600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29108132-29118131 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309774 5265 Fabidae View MSA
124050307 5270 Rosid View MSA
123753126 5271 Pentapetalae View MSA
122793763 5272 Eudicot View MSA
122045227 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.167443 0.0 0.658048 Low  
cufflinks 24.3068 0.0 64.8486 High High
cufflinks 8.7504 0.0 24.6014    
cufflinks 3.44347 0.0 10.9662    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.60462 0.0 16.6751    
cufflinks 0.0145965 0.0 0.066855 Low Low
cufflinks 0.440528 0.0 1.6609    
cufflinks 0.0831892 0.0 0.335491 Low  
cufflinks 1.156        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.484        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.106        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.878        
cufflinks 7.395       High
cufflinks 1.239        
cufflinks 0.011     Low Low
cufflinks 0.518        
cufflinks 1.009        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.709        
cufflinks 0.055     Low Low

0 Strain