Gene : Glyma.05G110700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR23042:SF61 - TRANSCRIPTION FACTOR BHLH18-RELATED Genomic Order:  1107
Name:  ? Glyma.05G110700 Secondary Identifier:  ? PAC:30524944
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G110700 0.5kb upstream 0.5kb upstream 3133 true Chr05: 29399811-29402943 Glycine max
Glyma.05G110700 0.5kb upstream 0.5kb upstream 500 false Chr05: 29402444-29402943 Glycine max
Glyma.05G110700 0.5kb downstream 0.5kb downstream 3133 true Chr05: 29399311-29402443 Glycine max
Glyma.05G110700 0.5kb downstream 0.5kb downstream 500 false Chr05: 29399311-29399810 Glycine max
Glyma.05G110700 1.0kb upstream 1.0kb upstream 3633 true Chr05: 29399811-29403443 Glycine max
Glyma.05G110700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29402444-29403443 Glycine max
Glyma.05G110700 1.0kb downstream 1.0kb downstream 3633 true Chr05: 29398811-29402443 Glycine max
Glyma.05G110700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29398811-29399810 Glycine max
Glyma.05G110700 2.0kb upstream 2.0kb upstream 4633 true Chr05: 29399811-29404443 Glycine max
Glyma.05G110700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29402444-29404443 Glycine max
Glyma.05G110700 2.0kb downstream 2.0kb downstream 4633 true Chr05: 29397811-29402443 Glycine max
Glyma.05G110700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29397811-29399810 Glycine max
Glyma.05G110700 5.0kb upstream 5.0kb upstream 7633 true Chr05: 29399811-29407443 Glycine max
Glyma.05G110700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29402444-29407443 Glycine max
Glyma.05G110700 5.0kb downstream 5.0kb downstream 7633 true Chr05: 29394811-29402443 Glycine max
Glyma.05G110700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29394811-29399810 Glycine max
Glyma.05G110700 10.0kb upstream 10.0kb upstream 12633 true Chr05: 29399811-29412443 Glycine max
Glyma.05G110700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29402444-29412443 Glycine max
Glyma.05G110700 10.0kb downstream 10.0kb downstream 12633 true Chr05: 29389811-29402443 Glycine max
Glyma.05G110700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29389811-29399810 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296259 5265 Fabidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0371678 0.0 0.153843 Low Low
cufflinks 1.89194 0.0 6.27483    
cufflinks 0.304169 0.0 1.14962    
cufflinks 0.318501 0.0 1.20217    
cufflinks 1.63601 0.0 5.52667    
cufflinks 1.18369 0.0 4.13319    
cufflinks 22.4644 0.0 60.0538 High High
cufflinks 0.0722217 0.0 0.289217 Low Low
cufflinks 0.620866 0.0 2.26884    
cufflinks 0.035     Low Low
cufflinks 0.038     Low Low
cufflinks 0.251        
cufflinks 1.61       High
cufflinks 1.728       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.644        
cufflinks 0.155        
cufflinks 0.387        
cufflinks 1.617       High
cufflinks 0.552        
cufflinks 0.06     Low Low
cufflinks 0.532        
cufflinks 1.513       High
cufflinks 0.021     Low Low
cufflinks 1.036        
cufflinks 0.144        

0 Strain