Gene : Glyma.05G111100 G. max Wm82.a2.v1
Defline:  (1 of 42) PF00076//PF14111 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Domain of unknown function (DUF4283) (DUF4283) Genomic Order:  1111
Name:  ? Glyma.05G111100 Secondary Identifier:  ? PAC:30524294
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G111100 0.5kb upstream 0.5kb upstream 2563 true Chr05: 29566884-29569446 Glycine max
Glyma.05G111100 0.5kb upstream 0.5kb upstream 500 false Chr05: 29568947-29569446 Glycine max
Glyma.05G111100 0.5kb downstream 0.5kb downstream 2563 true Chr05: 29566384-29568946 Glycine max
Glyma.05G111100 0.5kb downstream 0.5kb downstream 500 false Chr05: 29566384-29566883 Glycine max
Glyma.05G111100 1.0kb upstream 1.0kb upstream 3063 true Chr05: 29566884-29569946 Glycine max
Glyma.05G111100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29568947-29569946 Glycine max
Glyma.05G111100 1.0kb downstream 1.0kb downstream 3063 true Chr05: 29565884-29568946 Glycine max
Glyma.05G111100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29565884-29566883 Glycine max
Glyma.05G111100 2.0kb upstream 2.0kb upstream 4063 true Chr05: 29566884-29570946 Glycine max
Glyma.05G111100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29568947-29570946 Glycine max
Glyma.05G111100 2.0kb downstream 2.0kb downstream 4063 true Chr05: 29564884-29568946 Glycine max
Glyma.05G111100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29564884-29566883 Glycine max
Glyma.05G111100 5.0kb upstream 5.0kb upstream 7063 true Chr05: 29566884-29573946 Glycine max
Glyma.05G111100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29568947-29573946 Glycine max
Glyma.05G111100 5.0kb downstream 5.0kb downstream 7063 true Chr05: 29561884-29568946 Glycine max
Glyma.05G111100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29561884-29566883 Glycine max
Glyma.05G111100 10.0kb upstream 10.0kb upstream 12063 true Chr05: 29566884-29578946 Glycine max
Glyma.05G111100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29568947-29578946 Glycine max
Glyma.05G111100 10.0kb downstream 10.0kb downstream 12063 true Chr05: 29556884-29568946 Glycine max
Glyma.05G111100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29556884-29566883 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782035 5273 Angiosperm View MSA
122296546 5265 Fabidae View MSA
124040128 5270 Rosid View MSA
123751645 5271 Pentapetalae View MSA
122774115 5272 Eudicot View MSA
121053578 5274 Embryophyte View MSA
123093595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0183735 0.0 0.0786139 Low  
cufflinks 0.078689 0.0 0.311499 Low High
cufflinks 0.0160763 0.0 0.0694161 Low  
cufflinks 0.0180558 0.0 0.0773787 Low  
cufflinks 0.0336528 0.0 0.138046 Low  
cufflinks 0.0192112 0.0 0.0819203 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low High
cufflinks 0.015     Low  
cufflinks 0.023     Low  
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.019     Low  
cufflinks 0.007     Low Low
cufflinks 0.011     Low  
cufflinks 0.013     Low  
cufflinks 0.018     Low  
cufflinks 0.008     Low Low
cufflinks 0.035     Low High
cufflinks 0.008     Low Low
cufflinks 0.019     Low  
cufflinks 0.025     Low  
cufflinks 0.037     Low High

0 Strain