Gene : Glyma.05G105000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32370:SF26 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY3-RELATED Genomic Order:  1050
Name:  ? Glyma.05G105000 Secondary Identifier:  ? PAC:30523800
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G105000 0.5kb upstream 0.5kb upstream 7026 true Chr05: 27876953-27883978 Glycine max
Glyma.05G105000 0.5kb upstream 0.5kb upstream 500 false Chr05: 27883479-27883978 Glycine max
Glyma.05G105000 0.5kb downstream 0.5kb downstream 7026 true Chr05: 27876453-27883478 Glycine max
Glyma.05G105000 0.5kb downstream 0.5kb downstream 500 false Chr05: 27876453-27876952 Glycine max
Glyma.05G105000 1.0kb upstream 1.0kb upstream 7526 true Chr05: 27876953-27884478 Glycine max
Glyma.05G105000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 27883479-27884478 Glycine max
Glyma.05G105000 1.0kb downstream 1.0kb downstream 7526 true Chr05: 27875953-27883478 Glycine max
Glyma.05G105000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 27875953-27876952 Glycine max
Glyma.05G105000 2.0kb upstream 2.0kb upstream 8526 true Chr05: 27876953-27885478 Glycine max
Glyma.05G105000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 27883479-27885478 Glycine max
Glyma.05G105000 2.0kb downstream 2.0kb downstream 8526 true Chr05: 27874953-27883478 Glycine max
Glyma.05G105000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 27874953-27876952 Glycine max
Glyma.05G105000 5.0kb upstream 5.0kb upstream 11526 true Chr05: 27876953-27888478 Glycine max
Glyma.05G105000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 27883479-27888478 Glycine max
Glyma.05G105000 5.0kb downstream 5.0kb downstream 11526 true Chr05: 27871953-27883478 Glycine max
Glyma.05G105000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 27871953-27876952 Glycine max
Glyma.05G105000 10.0kb upstream 10.0kb upstream 16526 true Chr05: 27876953-27893478 Glycine max
Glyma.05G105000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 27883479-27893478 Glycine max
Glyma.05G105000 10.0kb downstream 10.0kb downstream 16526 true Chr05: 27866953-27883478 Glycine max
Glyma.05G105000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 27866953-27876952 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300314 5265 Fabidae View MSA
124069258 5270 Rosid View MSA
123743807 5271 Pentapetalae View MSA
122790043 5272 Eudicot View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.04262 0.0 12.6213    
cufflinks 15.5882 0.0 54.8072   High
cufflinks 17.9143 0.0 66.2714   High
cufflinks 3.2649 0.0 12.8168    
cufflinks 6.78863 0.0 22.7369    
cufflinks 2.84812 0.0 10.0988    
cufflinks 3.68991 0.0 12.8647    
cufflinks 4.00191 0.0 13.8523    
cufflinks 1.65767 0.0 6.96754   Low
cufflinks 0.449        
cufflinks 0.046     Low Low
cufflinks 3.167       High
cufflinks 1.032        
cufflinks 1.628        
cufflinks 0.007     Low Low
cufflinks 1.045        
cufflinks 0.065     Low  
cufflinks 1.039        
cufflinks 3.431       High
cufflinks 0.931        
cufflinks 0.031     Low Low
cufflinks 1.188        
cufflinks 1.198        
cufflinks 0.04     Low Low
cufflinks 1.049        
cufflinks 0.137        

0 Strain