Gene : Glyma.05G101900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13683//PTHR13683:SF342 - ASPARTYL PROTEASES Genomic Order:  1019
Name:  ? Glyma.05G101900 Secondary Identifier:  ? PAC:30525719
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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G101900 0.5kb upstream 0.5kb upstream 10133 true Chr05: 27079556-27089688 Glycine max
Glyma.05G101900 0.5kb upstream 0.5kb upstream 500 false Chr05: 27079556-27080055 Glycine max
Glyma.05G101900 0.5kb downstream 0.5kb downstream 10133 true Chr05: 27080056-27090188 Glycine max
Glyma.05G101900 0.5kb downstream 0.5kb downstream 500 false Chr05: 27089689-27090188 Glycine max
Glyma.05G101900 1.0kb upstream 1.0kb upstream 10633 true Chr05: 27079056-27089688 Glycine max
Glyma.05G101900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 27079056-27080055 Glycine max
Glyma.05G101900 1.0kb downstream 1.0kb downstream 10633 true Chr05: 27080056-27090688 Glycine max
Glyma.05G101900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 27089689-27090688 Glycine max
Glyma.05G101900 2.0kb upstream 2.0kb upstream 11633 true Chr05: 27078056-27089688 Glycine max
Glyma.05G101900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 27078056-27080055 Glycine max
Glyma.05G101900 2.0kb downstream 2.0kb downstream 11633 true Chr05: 27080056-27091688 Glycine max
Glyma.05G101900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 27089689-27091688 Glycine max
Glyma.05G101900 5.0kb upstream 5.0kb upstream 14633 true Chr05: 27075056-27089688 Glycine max
Glyma.05G101900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 27075056-27080055 Glycine max
Glyma.05G101900 5.0kb downstream 5.0kb downstream 14633 true Chr05: 27080056-27094688 Glycine max
Glyma.05G101900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 27089689-27094688 Glycine max
Glyma.05G101900 10.0kb upstream 10.0kb upstream 19633 true Chr05: 27070056-27089688 Glycine max
Glyma.05G101900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 27070056-27080055 Glycine max
Glyma.05G101900 10.0kb downstream 10.0kb downstream 19633 true Chr05: 27080056-27099688 Glycine max
Glyma.05G101900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 27089689-27099688 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308418 5265 Fabidae View MSA
124072520 5270 Rosid View MSA
123741714 5271 Pentapetalae View MSA
122786782 5272 Eudicot View MSA
122041856 5273 Angiosperm View MSA
121346441 5274 Embryophyte View MSA
123428674 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.15619 0.0 17.0033   High
cufflinks 3.28975 0.0 9.7493    
cufflinks 4.804 0.0 13.5986    
cufflinks 4.26021 0.0 12.2129    
cufflinks 4.11314 0.0 11.8288    
cufflinks 3.681 0.0 10.7349    
cufflinks 2.98385 0.0 8.97516   Low
cufflinks 5.44094 0.0 15.1853   High
cufflinks 3.67839 0.0 10.7271    
cufflinks 1.583        
cufflinks 1.867       High
cufflinks 1.313        
cufflinks 1.342        
cufflinks 1.403        
cufflinks 1.655        
cufflinks 1.615        
cufflinks 1.223       Low
cufflinks 1.598        
cufflinks 1.366        
cufflinks 1.252       Low
cufflinks 2.056       High
cufflinks 1.482        
cufflinks 1.546        
cufflinks 1.947       High
cufflinks 1.158       Low
cufflinks 1.669        

0 Strain