Gene : Glyma.05G129600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11712:SF226 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC Genomic Order:  1296
Name:  ? Glyma.05G129600 Secondary Identifier:  ? PAC:30524057
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax FASYN-ELONG-PWY Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY-6282 Glycine max pathologic  
Gmax PWY-7388 Glycine max pathologic  
Gmax PWY-7663 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G129600 0.5kb upstream 0.5kb upstream 6854 true Chr05: 32273519-32280372 Glycine max
Glyma.05G129600 0.5kb upstream 0.5kb upstream 500 false Chr05: 32273519-32274018 Glycine max
Glyma.05G129600 0.5kb downstream 0.5kb downstream 6854 true Chr05: 32274019-32280872 Glycine max
Glyma.05G129600 0.5kb downstream 0.5kb downstream 500 false Chr05: 32280373-32280872 Glycine max
Glyma.05G129600 1.0kb upstream 1.0kb upstream 7354 true Chr05: 32273019-32280372 Glycine max
Glyma.05G129600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32273019-32274018 Glycine max
Glyma.05G129600 1.0kb downstream 1.0kb downstream 7354 true Chr05: 32274019-32281372 Glycine max
Glyma.05G129600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32280373-32281372 Glycine max
Glyma.05G129600 2.0kb upstream 2.0kb upstream 8354 true Chr05: 32272019-32280372 Glycine max
Glyma.05G129600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32272019-32274018 Glycine max
Glyma.05G129600 2.0kb downstream 2.0kb downstream 8354 true Chr05: 32274019-32282372 Glycine max
Glyma.05G129600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32280373-32282372 Glycine max
Glyma.05G129600 5.0kb upstream 5.0kb upstream 11354 true Chr05: 32269019-32280372 Glycine max
Glyma.05G129600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32269019-32274018 Glycine max
Glyma.05G129600 5.0kb downstream 5.0kb downstream 11354 true Chr05: 32274019-32285372 Glycine max
Glyma.05G129600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32280373-32285372 Glycine max
Glyma.05G129600 10.0kb upstream 10.0kb upstream 16354 true Chr05: 32264019-32280372 Glycine max
Glyma.05G129600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32264019-32274018 Glycine max
Glyma.05G129600 10.0kb downstream 10.0kb downstream 16354 true Chr05: 32274019-32290372 Glycine max
Glyma.05G129600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32280373-32290372 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307628 5265 Fabidae View MSA
124064004 5270 Rosid View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.41658 0.0 10.2336   Low
cufflinks 11.0813 0.0 29.7961    
cufflinks 2.62844 0.0 8.23141   Low
cufflinks 10.9393 0.0 29.4122    
cufflinks 22.7084 0.0 61.0677 High High
cufflinks 8.61829 0.0 23.4121    
cufflinks 22.2595 0.0 59.795 High High
cufflinks 8.40781 0.0 22.929    
cufflinks 10.5903 0.0 28.4948    
cufflinks 4.016        
cufflinks 0.255       Low
cufflinks 1.707        
cufflinks 7.622     High High
cufflinks 11.939     High High
cufflinks 0.518       Low
cufflinks 4.251        
cufflinks 1.116        
cufflinks 2.82        
cufflinks 4.555        
cufflinks 3.043        
cufflinks 0.611       Low
cufflinks 3.112        
cufflinks 4.89        
cufflinks 0.373       Low
cufflinks 3.585        
cufflinks 1.104        

0 Strain