Gene : Glyma.05G125700 G. max Wm82.a2.v1
Defline:  (1 of 1) PF02735//PF03730//PF03731//PF08785 - Ku70/Ku80 beta-barrel domain (Ku) // Ku70/Ku80 C-terminal arm (Ku_C) // Ku70/Ku80 N-terminal alpha/beta domain (Ku_N) // Ku C terminal domain like (Ku_PK_bind) Genomic Order:  1257
Name:  ? Glyma.05G125700 Secondary Identifier:  ? PAC:30527359
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G125700 0.5kb upstream 0.5kb upstream 8322 true Chr05: 31885978-31894299 Glycine max
Glyma.05G125700 0.5kb upstream 0.5kb upstream 500 false Chr05: 31885978-31886477 Glycine max
Glyma.05G125700 0.5kb downstream 0.5kb downstream 8322 true Chr05: 31886478-31894799 Glycine max
Glyma.05G125700 0.5kb downstream 0.5kb downstream 500 false Chr05: 31894300-31894799 Glycine max
Glyma.05G125700 1.0kb upstream 1.0kb upstream 8822 true Chr05: 31885478-31894299 Glycine max
Glyma.05G125700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31885478-31886477 Glycine max
Glyma.05G125700 1.0kb downstream 1.0kb downstream 8822 true Chr05: 31886478-31895299 Glycine max
Glyma.05G125700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31894300-31895299 Glycine max
Glyma.05G125700 2.0kb upstream 2.0kb upstream 9822 true Chr05: 31884478-31894299 Glycine max
Glyma.05G125700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31884478-31886477 Glycine max
Glyma.05G125700 2.0kb downstream 2.0kb downstream 9822 true Chr05: 31886478-31896299 Glycine max
Glyma.05G125700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31894300-31896299 Glycine max
Glyma.05G125700 5.0kb upstream 5.0kb upstream 12822 true Chr05: 31881478-31894299 Glycine max
Glyma.05G125700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31881478-31886477 Glycine max
Glyma.05G125700 5.0kb downstream 5.0kb downstream 12822 true Chr05: 31886478-31899299 Glycine max
Glyma.05G125700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31894300-31899299 Glycine max
Glyma.05G125700 10.0kb upstream 10.0kb upstream 17822 true Chr05: 31876478-31894299 Glycine max
Glyma.05G125700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31876478-31886477 Glycine max
Glyma.05G125700 10.0kb downstream 10.0kb downstream 17822 true Chr05: 31886478-31904299 Glycine max
Glyma.05G125700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31894300-31904299 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304837 5265 Fabidae View MSA
124065109 5270 Rosid View MSA
123746123 5271 Pentapetalae View MSA
122786375 5272 Eudicot View MSA
122050480 5273 Angiosperm View MSA
121345940 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.94998 0.0 28.0639    
cufflinks 10.226 0.0 35.2651   High
cufflinks 6.1981 0.0 22.3659    
cufflinks 5.5114 0.0 20.3291   Low
cufflinks 8.12303 0.0 28.5078    
cufflinks 6.97722 0.0 24.9855    
cufflinks 7.82426 0.0 27.5678    
cufflinks 4.73823 0.0 15.6533   Low
cufflinks 7.90097 0.0 27.8832    
cufflinks 0.993        
cufflinks 0.777       Low
cufflinks 1.361        
cufflinks 2.037       High
cufflinks 2.257       High
cufflinks 1.138        
cufflinks 1.363        
cufflinks 0.797       Low
cufflinks 1.213        
cufflinks 2.685       High
cufflinks 0.972        
cufflinks 0.922        
cufflinks 1.229        
cufflinks 1.751        
cufflinks 0.886        
cufflinks 1.146        
cufflinks 1.361        

0 Strain