Gene : Glyma.05G127400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10840 - PROGRAMMED CELL DEATH PROTEIN 5 Genomic Order:  1274
Name:  ? Glyma.05G127400 Secondary Identifier:  ? PAC:30526056
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G127400 0.5kb upstream 0.5kb upstream 4102 true Chr05: 32029615-32033716 Glycine max
Glyma.05G127400 0.5kb upstream 0.5kb upstream 500 false Chr05: 32029615-32030114 Glycine max
Glyma.05G127400 0.5kb downstream 0.5kb downstream 4102 true Chr05: 32030115-32034216 Glycine max
Glyma.05G127400 0.5kb downstream 0.5kb downstream 500 false Chr05: 32033717-32034216 Glycine max
Glyma.05G127400 1.0kb upstream 1.0kb upstream 4602 true Chr05: 32029115-32033716 Glycine max
Glyma.05G127400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32029115-32030114 Glycine max
Glyma.05G127400 1.0kb downstream 1.0kb downstream 4602 true Chr05: 32030115-32034716 Glycine max
Glyma.05G127400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32033717-32034716 Glycine max
Glyma.05G127400 2.0kb upstream 2.0kb upstream 5602 true Chr05: 32028115-32033716 Glycine max
Glyma.05G127400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32028115-32030114 Glycine max
Glyma.05G127400 2.0kb downstream 2.0kb downstream 5602 true Chr05: 32030115-32035716 Glycine max
Glyma.05G127400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32033717-32035716 Glycine max
Glyma.05G127400 5.0kb upstream 5.0kb upstream 8602 true Chr05: 32025115-32033716 Glycine max
Glyma.05G127400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32025115-32030114 Glycine max
Glyma.05G127400 5.0kb downstream 5.0kb downstream 8602 true Chr05: 32030115-32038716 Glycine max
Glyma.05G127400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32033717-32038716 Glycine max
Glyma.05G127400 10.0kb upstream 10.0kb upstream 13602 true Chr05: 32020115-32033716 Glycine max
Glyma.05G127400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32020115-32030114 Glycine max
Glyma.05G127400 10.0kb downstream 10.0kb downstream 13602 true Chr05: 32030115-32043716 Glycine max
Glyma.05G127400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32033717-32043716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300116 5265 Fabidae View MSA
124064859 5270 Rosid View MSA
123737967 5271 Pentapetalae View MSA
122786334 5272 Eudicot View MSA
122044055 5273 Angiosperm View MSA
121343869 5274 Embryophyte View MSA
123426803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.09747 0.0 38.0494    
cufflinks 11.8154 0.0 46.1264    
cufflinks 5.79282 0.0 27.1056   Low
cufflinks 8.94244 0.0 37.7281    
cufflinks 13.5857 0.0 51.837    
cufflinks 15.811 0.0 58.1946   High
cufflinks 11.7469 0.0 45.7307    
cufflinks 12.6853 0.0 49.7724    
cufflinks 16.3632 0.0 59.4375   High
cufflinks 1.193        
cufflinks 0.977        
cufflinks 0.734       Low
cufflinks 1.712       High
cufflinks 1.775       High
cufflinks 2.249       High
cufflinks 1.384        
cufflinks 1.243        
cufflinks 0.914       Low
cufflinks 1.385        
cufflinks 1.34        
cufflinks 1.062        
cufflinks 1.447        
cufflinks 0.986        
cufflinks 1.052        
cufflinks 1.376        
cufflinks 1.159        

0 Strain