Gene : Glyma.05G120100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31827:SF1 - EMB Genomic Order:  1201
Name:  ? Glyma.05G120100 Secondary Identifier:  ? PAC:30525616
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G120100 0.5kb upstream 0.5kb upstream 5802 true Chr05: 31316517-31322318 Glycine max
Glyma.05G120100 0.5kb upstream 0.5kb upstream 500 false Chr05: 31316517-31317016 Glycine max
Glyma.05G120100 0.5kb downstream 0.5kb downstream 5802 true Chr05: 31317017-31322818 Glycine max
Glyma.05G120100 0.5kb downstream 0.5kb downstream 500 false Chr05: 31322319-31322818 Glycine max
Glyma.05G120100 1.0kb upstream 1.0kb upstream 6302 true Chr05: 31316017-31322318 Glycine max
Glyma.05G120100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31316017-31317016 Glycine max
Glyma.05G120100 1.0kb downstream 1.0kb downstream 6302 true Chr05: 31317017-31323318 Glycine max
Glyma.05G120100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31322319-31323318 Glycine max
Glyma.05G120100 2.0kb upstream 2.0kb upstream 7302 true Chr05: 31315017-31322318 Glycine max
Glyma.05G120100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31315017-31317016 Glycine max
Glyma.05G120100 2.0kb downstream 2.0kb downstream 7302 true Chr05: 31317017-31324318 Glycine max
Glyma.05G120100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31322319-31324318 Glycine max
Glyma.05G120100 5.0kb upstream 5.0kb upstream 10302 true Chr05: 31312017-31322318 Glycine max
Glyma.05G120100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31312017-31317016 Glycine max
Glyma.05G120100 5.0kb downstream 5.0kb downstream 10302 true Chr05: 31317017-31327318 Glycine max
Glyma.05G120100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31322319-31327318 Glycine max
Glyma.05G120100 10.0kb upstream 10.0kb upstream 15302 true Chr05: 31307017-31322318 Glycine max
Glyma.05G120100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31307017-31317016 Glycine max
Glyma.05G120100 10.0kb downstream 10.0kb downstream 15302 true Chr05: 31317017-31332318 Glycine max
Glyma.05G120100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31322319-31332318 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041326 5273 Angiosperm View MSA
122299950 5265 Fabidae View MSA
124067147 5270 Rosid View MSA
123737045 5271 Pentapetalae View MSA
122789501 5272 Eudicot View MSA
121351095 5274 Embryophyte View MSA
123426398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.5697 0.0 204.042 High High
cufflinks 18.3161 0.0 73.2754    
cufflinks 28.1273 0.0 110.329 High  
cufflinks 26.9828 0.0 104.851 High  
cufflinks 24.0343 0.0 101.647 High  
cufflinks 31.0639 0.0 125.641 High  
cufflinks 6.54139 0.0 25.0978   Low
cufflinks 46.1353 0.0 212.994 High High
cufflinks 26.6601 0.0 102.634 High  
cufflinks 5.417        
cufflinks 4.373        
cufflinks 6.51        
cufflinks 3.864        
cufflinks 2.858       Low
cufflinks 4.435        
cufflinks 6.807        
cufflinks 2.796       Low
cufflinks 7.194        
cufflinks 4.615        
cufflinks 7.229     High  
cufflinks 3.848        
cufflinks 8.814     High High
cufflinks 6.274        
cufflinks 5.257        
cufflinks 8.405     High High
cufflinks 3.276       Low

0 Strain