Gene : Glyma.05G121000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13370 - RNA METHYLASE-RELATED Genomic Order:  1210
Name:  ? Glyma.05G121000 Secondary Identifier:  ? PAC:30525650
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6829 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G121000 0.5kb upstream 0.5kb upstream 4150 true Chr05: 31383894-31388043 Glycine max
Glyma.05G121000 0.5kb upstream 0.5kb upstream 500 false Chr05: 31387544-31388043 Glycine max
Glyma.05G121000 0.5kb downstream 0.5kb downstream 4150 true Chr05: 31383394-31387543 Glycine max
Glyma.05G121000 0.5kb downstream 0.5kb downstream 500 false Chr05: 31383394-31383893 Glycine max
Glyma.05G121000 1.0kb upstream 1.0kb upstream 4650 true Chr05: 31383894-31388543 Glycine max
Glyma.05G121000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31387544-31388543 Glycine max
Glyma.05G121000 1.0kb downstream 1.0kb downstream 4650 true Chr05: 31382894-31387543 Glycine max
Glyma.05G121000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31382894-31383893 Glycine max
Glyma.05G121000 2.0kb upstream 2.0kb upstream 5650 true Chr05: 31383894-31389543 Glycine max
Glyma.05G121000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31387544-31389543 Glycine max
Glyma.05G121000 2.0kb downstream 2.0kb downstream 5650 true Chr05: 31381894-31387543 Glycine max
Glyma.05G121000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31381894-31383893 Glycine max
Glyma.05G121000 5.0kb upstream 5.0kb upstream 8650 true Chr05: 31383894-31392543 Glycine max
Glyma.05G121000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31387544-31392543 Glycine max
Glyma.05G121000 5.0kb downstream 5.0kb downstream 8650 true Chr05: 31378894-31387543 Glycine max
Glyma.05G121000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31378894-31383893 Glycine max
Glyma.05G121000 10.0kb upstream 10.0kb upstream 13650 true Chr05: 31383894-31397543 Glycine max
Glyma.05G121000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31387544-31397543 Glycine max
Glyma.05G121000 10.0kb downstream 10.0kb downstream 13650 true Chr05: 31373894-31387543 Glycine max
Glyma.05G121000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31373894-31383893 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304995 5265 Fabidae View MSA
124065317 5270 Rosid View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.80269 0.0 14.0506    
cufflinks 5.4543 0.0 15.712    
cufflinks 1.9557 0.0 6.46398   Low
cufflinks 4.34718 0.0 12.8657    
cufflinks 5.02645 0.0 14.606    
cufflinks 2.84932 0.0 8.95237    
cufflinks 6.95015 0.0 19.4808   High
cufflinks 3.32255 0.0 10.2115    
cufflinks 5.54075 0.0 15.8963    
cufflinks 0.706        
cufflinks 0.292       Low
cufflinks 2.2       High
cufflinks 3.253       High
cufflinks 3.963       High
cufflinks 0.601        
cufflinks 0.717        
cufflinks 0.879        
cufflinks 1.74        
cufflinks 2.804       High
cufflinks 0.361       Low
cufflinks 0.452        
cufflinks 0.548        
cufflinks 1.321        
cufflinks 0.35       Low
cufflinks 0.483        
cufflinks 0.632        

0 Strain