Gene : Glyma.05G116900 G. max Wm82.a2.v1
Defline:  (1 of 14) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  1169
Name:  ? Glyma.05G116900 Secondary Identifier:  ? PAC:30526143
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G116900 0.5kb upstream 0.5kb upstream 4568 true Chr05: 30974775-30979342 Glycine max
Glyma.05G116900 0.5kb upstream 0.5kb upstream 500 false Chr05: 30974775-30975274 Glycine max
Glyma.05G116900 0.5kb downstream 0.5kb downstream 4568 true Chr05: 30975275-30979842 Glycine max
Glyma.05G116900 0.5kb downstream 0.5kb downstream 500 false Chr05: 30979343-30979842 Glycine max
Glyma.05G116900 1.0kb upstream 1.0kb upstream 5068 true Chr05: 30974275-30979342 Glycine max
Glyma.05G116900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 30974275-30975274 Glycine max
Glyma.05G116900 1.0kb downstream 1.0kb downstream 5068 true Chr05: 30975275-30980342 Glycine max
Glyma.05G116900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 30979343-30980342 Glycine max
Glyma.05G116900 2.0kb upstream 2.0kb upstream 6068 true Chr05: 30973275-30979342 Glycine max
Glyma.05G116900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 30973275-30975274 Glycine max
Glyma.05G116900 2.0kb downstream 2.0kb downstream 6068 true Chr05: 30975275-30981342 Glycine max
Glyma.05G116900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 30979343-30981342 Glycine max
Glyma.05G116900 5.0kb upstream 5.0kb upstream 9068 true Chr05: 30970275-30979342 Glycine max
Glyma.05G116900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 30970275-30975274 Glycine max
Glyma.05G116900 5.0kb downstream 5.0kb downstream 9068 true Chr05: 30975275-30984342 Glycine max
Glyma.05G116900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 30979343-30984342 Glycine max
Glyma.05G116900 10.0kb upstream 10.0kb upstream 14068 true Chr05: 30965275-30979342 Glycine max
Glyma.05G116900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 30965275-30975274 Glycine max
Glyma.05G116900 10.0kb downstream 10.0kb downstream 14068 true Chr05: 30975275-30989342 Glycine max
Glyma.05G116900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 30979343-30989342 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301286 5265 Fabidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.586293 0.0 3.90917    
cufflinks 1.03108 0.0 4.77484    
cufflinks 1.13583 0.0 8.8687    
cufflinks 1.26689 0.0 5.69209    
cufflinks 1.59458 0.0 9.90538    
cufflinks 1.89355 0.0 10.5234    
cufflinks 28.7091 0.0 85.0147 High High
cufflinks 0.301642 0.0 1.17235   Low
cufflinks 1.84549 0.0 10.2664    
cufflinks 0.128        
cufflinks 0.165       High
cufflinks 0.147        
cufflinks 0.1        
cufflinks 0.038     Low Low
cufflinks 0.168       High
cufflinks 0.047     Low  
cufflinks 0.081        
cufflinks 0.313       High
cufflinks 0.099     Low  
cufflinks 0.038     Low Low
cufflinks 0.104        
cufflinks 0.05     Low  
cufflinks 0.047     Low  
cufflinks 0.138        
cufflinks 0.041     Low Low
cufflinks 0.077        

0 Strain