Gene : Glyma.05G141900 G. max Wm82.a2.v1
Defline:  (1 of 7) 2.6.1.13 - Ornithine aminotransferase / Ornithine--oxo-acid transaminase Genomic Order:  1419
Name:  ? Glyma.05G141900 Secondary Identifier:  ? PAC:30525248
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGASEDEG-PWY Glycine max pathologic  
Gmax ARGININE-SYN4-PWY Glycine max pathologic  
Gmax ARG-PRO-PWY Glycine max pathologic  
Gmax CITRULBIO-PWY Glycine max pathologic  
Gmax PWY-3341 Glycine max pathologic  
Gmax PWY-6922 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G141900 0.5kb upstream 0.5kb upstream 10178 true Chr05: 33518563-33528740 Glycine max
Glyma.05G141900 0.5kb upstream 0.5kb upstream 500 false Chr05: 33518563-33519062 Glycine max
Glyma.05G141900 0.5kb downstream 0.5kb downstream 10178 true Chr05: 33519063-33529240 Glycine max
Glyma.05G141900 0.5kb downstream 0.5kb downstream 500 false Chr05: 33528741-33529240 Glycine max
Glyma.05G141900 1.0kb upstream 1.0kb upstream 10678 true Chr05: 33518063-33528740 Glycine max
Glyma.05G141900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33518063-33519062 Glycine max
Glyma.05G141900 1.0kb downstream 1.0kb downstream 10678 true Chr05: 33519063-33529740 Glycine max
Glyma.05G141900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33528741-33529740 Glycine max
Glyma.05G141900 2.0kb upstream 2.0kb upstream 11678 true Chr05: 33517063-33528740 Glycine max
Glyma.05G141900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33517063-33519062 Glycine max
Glyma.05G141900 2.0kb downstream 2.0kb downstream 11678 true Chr05: 33519063-33530740 Glycine max
Glyma.05G141900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33528741-33530740 Glycine max
Glyma.05G141900 5.0kb upstream 5.0kb upstream 14678 true Chr05: 33514063-33528740 Glycine max
Glyma.05G141900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33514063-33519062 Glycine max
Glyma.05G141900 5.0kb downstream 5.0kb downstream 14678 true Chr05: 33519063-33533740 Glycine max
Glyma.05G141900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33528741-33533740 Glycine max
Glyma.05G141900 10.0kb upstream 10.0kb upstream 19678 true Chr05: 33509063-33528740 Glycine max
Glyma.05G141900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33509063-33519062 Glycine max
Glyma.05G141900 10.0kb downstream 10.0kb downstream 19678 true Chr05: 33519063-33538740 Glycine max
Glyma.05G141900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33528741-33538740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308763 5265 Fabidae View MSA
124066510 5270 Rosid View MSA
123747705 5271 Pentapetalae View MSA
122789437 5272 Eudicot View MSA
122044834 5273 Angiosperm View MSA
121345718 5274 Embryophyte View MSA
123423939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0052 0.0 41.9728    
cufflinks 11.2293 0.0 34.2395    
cufflinks 12.1755 0.0 50.6921    
cufflinks 10.588 0.0 32.4269    
cufflinks 12.3005 0.0 37.1022    
cufflinks 15.8841 0.0 58.83   High
cufflinks 8.31623 0.0 32.5457   Low
cufflinks 11.9642 0.0 36.2606    
cufflinks 12.9998 0.0 46.5086    
cufflinks 0.486        
cufflinks 1.214       High
cufflinks 0.847       High
cufflinks 0.66        
cufflinks 0.694        
cufflinks 0.665        
cufflinks 0.424       Low
cufflinks 0.319       Low
cufflinks 0.843        
cufflinks 0.726        
cufflinks 0.492        
cufflinks 0.69        
cufflinks 0.514        
cufflinks 0.4       Low
cufflinks 0.848       High
cufflinks 0.54        
cufflinks 0.413       Low

0 Strain