Gene : Glyma.05G142000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31072:SF2 - TRANSCRIPTION FACTOR TCP2-RELATED Genomic Order:  1420
Name:  ? Glyma.05G142000 Secondary Identifier:  ? PAC:30525220
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G142000 0.5kb upstream 0.5kb upstream 9526 true Chr05: 33530449-33539974 Glycine max
Glyma.05G142000 0.5kb upstream 0.5kb upstream 500 false Chr05: 33539475-33539974 Glycine max
Glyma.05G142000 0.5kb downstream 0.5kb downstream 9526 true Chr05: 33529949-33539474 Glycine max
Glyma.05G142000 0.5kb downstream 0.5kb downstream 500 false Chr05: 33529949-33530448 Glycine max
Glyma.05G142000 1.0kb upstream 1.0kb upstream 10026 true Chr05: 33530449-33540474 Glycine max
Glyma.05G142000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33539475-33540474 Glycine max
Glyma.05G142000 1.0kb downstream 1.0kb downstream 10026 true Chr05: 33529449-33539474 Glycine max
Glyma.05G142000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33529449-33530448 Glycine max
Glyma.05G142000 2.0kb upstream 2.0kb upstream 11026 true Chr05: 33530449-33541474 Glycine max
Glyma.05G142000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33539475-33541474 Glycine max
Glyma.05G142000 2.0kb downstream 2.0kb downstream 11026 true Chr05: 33528449-33539474 Glycine max
Glyma.05G142000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33528449-33530448 Glycine max
Glyma.05G142000 5.0kb upstream 5.0kb upstream 14026 true Chr05: 33530449-33544474 Glycine max
Glyma.05G142000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33539475-33544474 Glycine max
Glyma.05G142000 5.0kb downstream 5.0kb downstream 14026 true Chr05: 33525449-33539474 Glycine max
Glyma.05G142000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33525449-33530448 Glycine max
Glyma.05G142000 10.0kb upstream 10.0kb upstream 19026 true Chr05: 33530449-33549474 Glycine max
Glyma.05G142000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33539475-33549474 Glycine max
Glyma.05G142000 10.0kb downstream 10.0kb downstream 19026 true Chr05: 33520449-33539474 Glycine max
Glyma.05G142000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33520449-33530448 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250487 5265 Fabidae View MSA
124069412 5270 Rosid View MSA
123743584 5271 Pentapetalae View MSA
122787368 5272 Eudicot View MSA
122042527 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9539 0.0 95.7311 High High
cufflinks 14.5223 0.0 55.8217   High
cufflinks 2.96336 0.0 14.7365    
cufflinks 4.08297 0.0 18.292    
cufflinks 1.65308 0.0 9.99977    
cufflinks 5.78543 0.0 23.5725    
cufflinks 2.01914 0.0 9.9347    
cufflinks 0.461084 0.0 3.78946   Low
cufflinks 6.28656 0.0 24.8423    
cufflinks 0.059     Low Low
cufflinks 1.292        
cufflinks 0.329        
cufflinks 0.301        
cufflinks 0.017     Low Low
cufflinks 0.419        
cufflinks 2.214        
cufflinks 0.288        
cufflinks 0.526        
cufflinks 1.24        
cufflinks 2.718       High
cufflinks 0.666        
cufflinks 2.485       High
cufflinks 2.213        
cufflinks 1.443        
cufflinks 2.297        
cufflinks 0.203        

0 Strain