Gene : Glyma.05G142300 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG4422 - Uncharacterized conserved protein Genomic Order:  1423
Name:  ? Glyma.05G142300 Secondary Identifier:  ? PAC:30524417
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G142300 0.5kb upstream 0.5kb upstream 2785 true Chr05: 33567286-33570070 Glycine max
Glyma.05G142300 0.5kb upstream 0.5kb upstream 500 false Chr05: 33569571-33570070 Glycine max
Glyma.05G142300 0.5kb downstream 0.5kb downstream 2785 true Chr05: 33566786-33569570 Glycine max
Glyma.05G142300 0.5kb downstream 0.5kb downstream 500 false Chr05: 33566786-33567285 Glycine max
Glyma.05G142300 1.0kb upstream 1.0kb upstream 3285 true Chr05: 33567286-33570570 Glycine max
Glyma.05G142300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33569571-33570570 Glycine max
Glyma.05G142300 1.0kb downstream 1.0kb downstream 3285 true Chr05: 33566286-33569570 Glycine max
Glyma.05G142300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33566286-33567285 Glycine max
Glyma.05G142300 2.0kb upstream 2.0kb upstream 4285 true Chr05: 33567286-33571570 Glycine max
Glyma.05G142300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33569571-33571570 Glycine max
Glyma.05G142300 2.0kb downstream 2.0kb downstream 4285 true Chr05: 33565286-33569570 Glycine max
Glyma.05G142300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33565286-33567285 Glycine max
Glyma.05G142300 5.0kb upstream 5.0kb upstream 7285 true Chr05: 33567286-33574570 Glycine max
Glyma.05G142300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33569571-33574570 Glycine max
Glyma.05G142300 5.0kb downstream 5.0kb downstream 7285 true Chr05: 33562286-33569570 Glycine max
Glyma.05G142300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33562286-33567285 Glycine max
Glyma.05G142300 10.0kb upstream 10.0kb upstream 12285 true Chr05: 33567286-33579570 Glycine max
Glyma.05G142300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33569571-33579570 Glycine max
Glyma.05G142300 10.0kb downstream 10.0kb downstream 12285 true Chr05: 33557286-33569570 Glycine max
Glyma.05G142300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33557286-33567285 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304903 5265 Fabidae View MSA
124067388 5270 Rosid View MSA
123740629 5271 Pentapetalae View MSA
122786381 5272 Eudicot View MSA
122046453 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310608 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.44873 0.0 9.99978    
cufflinks 6.01241 0.0 16.5174    
cufflinks 1.40174 0.0 4.6159   Low
cufflinks 5.30047 0.0 14.6909    
cufflinks 7.11366 0.0 19.263    
cufflinks 1.86839 0.0 5.88636   Low
cufflinks 7.94212 0.0 21.3955   High
cufflinks 4.00473 0.0 11.4341    
cufflinks 4.62582 0.0 12.9794    
cufflinks 3.819        
cufflinks 0.464       Low
cufflinks 5.725        
cufflinks 7.871     High  
cufflinks 12.802     High High
cufflinks 1.357        
cufflinks 3.944        
cufflinks 1.471        
cufflinks 6.15        
cufflinks 8.714     High High
cufflinks 3.449        
cufflinks 0.7       Low
cufflinks 4.125        
cufflinks 6.84        
cufflinks 0.532       Low
cufflinks 3.688        
cufflinks 1.068        

0 Strain