Gene : Glyma.05G142400 G. max Wm82.a2.v1
Defline:  (1 of 1) PF06609 - Fungal trichothecene efflux pump (TRI12) (TRI12) Genomic Order:  1424
Name:  ? Glyma.05G142400 Secondary Identifier:  ? PAC:30525224
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G142400 0.5kb upstream 0.5kb upstream 6006 true Chr05: 33575915-33581920 Glycine max
Glyma.05G142400 0.5kb upstream 0.5kb upstream 500 false Chr05: 33581421-33581920 Glycine max
Glyma.05G142400 0.5kb downstream 0.5kb downstream 6006 true Chr05: 33575415-33581420 Glycine max
Glyma.05G142400 0.5kb downstream 0.5kb downstream 500 false Chr05: 33575415-33575914 Glycine max
Glyma.05G142400 1.0kb upstream 1.0kb upstream 6506 true Chr05: 33575915-33582420 Glycine max
Glyma.05G142400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33581421-33582420 Glycine max
Glyma.05G142400 1.0kb downstream 1.0kb downstream 6506 true Chr05: 33574915-33581420 Glycine max
Glyma.05G142400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33574915-33575914 Glycine max
Glyma.05G142400 2.0kb upstream 2.0kb upstream 7506 true Chr05: 33575915-33583420 Glycine max
Glyma.05G142400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33581421-33583420 Glycine max
Glyma.05G142400 2.0kb downstream 2.0kb downstream 7506 true Chr05: 33573915-33581420 Glycine max
Glyma.05G142400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33573915-33575914 Glycine max
Glyma.05G142400 5.0kb upstream 5.0kb upstream 10506 true Chr05: 33575915-33586420 Glycine max
Glyma.05G142400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33581421-33586420 Glycine max
Glyma.05G142400 5.0kb downstream 5.0kb downstream 10506 true Chr05: 33570915-33581420 Glycine max
Glyma.05G142400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33570915-33575914 Glycine max
Glyma.05G142400 10.0kb upstream 10.0kb upstream 15506 true Chr05: 33575915-33591420 Glycine max
Glyma.05G142400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33581421-33591420 Glycine max
Glyma.05G142400 10.0kb downstream 10.0kb downstream 15506 true Chr05: 33565915-33581420 Glycine max
Glyma.05G142400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33565915-33575914 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254779 5265 Fabidae View MSA
123996791 5270 Rosid View MSA
123748026 5271 Pentapetalae View MSA
122787366 5272 Eudicot View MSA
122041664 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121348445 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.37277 0.0 15.1322    
cufflinks 2.10949 0.0 6.72972    
cufflinks 17.2561 0.0 46.0831    
cufflinks 56.5829 0.0 166.037 High High
cufflinks 2.33536 0.0 7.32828    
cufflinks 2.43742 0.0 7.59731    
cufflinks 20.9515 0.0 56.2157   High
cufflinks 3.22125 0.0 9.64159    
cufflinks 3.64287 0.0 10.7364    
cufflinks 2.791        
cufflinks 0.442       Low
cufflinks 7.423     High High
cufflinks 2.533        
cufflinks 2.225        
cufflinks 0.144       Low
cufflinks 1.923        
cufflinks 0.758        
cufflinks 11.664     High High
cufflinks 0.757        
cufflinks 2.885        
cufflinks 0.527        
cufflinks 2.591        
cufflinks 1.691        
cufflinks 0.476        
cufflinks 2.049        
cufflinks 0.686        

0 Strain