Gene : Glyma.05G143100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR15835:SF6 - F20D23.9 PROTEIN Genomic Order:  1431
Name:  ? Glyma.05G143100 Secondary Identifier:  ? PAC:30524512
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G143100 0.5kb upstream 0.5kb upstream 10087 true Chr05: 33662667-33672753 Glycine max
Glyma.05G143100 0.5kb upstream 0.5kb upstream 500 false Chr05: 33662667-33663166 Glycine max
Glyma.05G143100 0.5kb downstream 0.5kb downstream 10087 true Chr05: 33663167-33673253 Glycine max
Glyma.05G143100 0.5kb downstream 0.5kb downstream 500 false Chr05: 33672754-33673253 Glycine max
Glyma.05G143100 1.0kb upstream 1.0kb upstream 10587 true Chr05: 33662167-33672753 Glycine max
Glyma.05G143100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33662167-33663166 Glycine max
Glyma.05G143100 1.0kb downstream 1.0kb downstream 10587 true Chr05: 33663167-33673753 Glycine max
Glyma.05G143100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33672754-33673753 Glycine max
Glyma.05G143100 2.0kb upstream 2.0kb upstream 11587 true Chr05: 33661167-33672753 Glycine max
Glyma.05G143100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33661167-33663166 Glycine max
Glyma.05G143100 2.0kb downstream 2.0kb downstream 11587 true Chr05: 33663167-33674753 Glycine max
Glyma.05G143100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33672754-33674753 Glycine max
Glyma.05G143100 5.0kb upstream 5.0kb upstream 14587 true Chr05: 33658167-33672753 Glycine max
Glyma.05G143100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33658167-33663166 Glycine max
Glyma.05G143100 5.0kb downstream 5.0kb downstream 14587 true Chr05: 33663167-33677753 Glycine max
Glyma.05G143100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33672754-33677753 Glycine max
Glyma.05G143100 10.0kb upstream 10.0kb upstream 19587 true Chr05: 33653167-33672753 Glycine max
Glyma.05G143100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33653167-33663166 Glycine max
Glyma.05G143100 10.0kb downstream 10.0kb downstream 19587 true Chr05: 33663167-33682753 Glycine max
Glyma.05G143100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33672754-33682753 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306161 5265 Fabidae View MSA
124065302 5270 Rosid View MSA
123751244 5271 Pentapetalae View MSA
122788021 5272 Eudicot View MSA
122045588 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.15455 0.0 21.469    
cufflinks 10.3303 0.0 35.6955    
cufflinks 9.89241 0.0 34.0812    
cufflinks 8.78922 0.0 30.0201    
cufflinks 8.10906 0.0 24.243    
cufflinks 7.02169 0.0 21.045    
cufflinks 14.5792 0.0 51.3625   High
cufflinks 6.65168 0.0 23.0774   Low
cufflinks 9.40372 0.0 32.1355    
cufflinks 1.379       Low
cufflinks 2.006        
cufflinks 2.497        
cufflinks 2.046        
cufflinks 2.134        
cufflinks 2.178        
cufflinks 3.209       High
cufflinks 1.778       Low
cufflinks 2.576        
cufflinks 3.111       High
cufflinks 3.237       High
cufflinks 1.999        
cufflinks 3.278       High
cufflinks 3.032        
cufflinks 2.368        
cufflinks 3.103       High
cufflinks 1.546       Low

0 Strain