Gene : Glyma.05G144000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11214:SF92 - BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  1440
Name:  ? Glyma.05G144000 Secondary Identifier:  ? PAC:30525096
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G144000 0.5kb upstream 0.5kb upstream 6818 true Chr05: 33795707-33802524 Glycine max
Glyma.05G144000 0.5kb upstream 0.5kb upstream 500 false Chr05: 33795707-33796206 Glycine max
Glyma.05G144000 0.5kb downstream 0.5kb downstream 6818 true Chr05: 33796207-33803024 Glycine max
Glyma.05G144000 0.5kb downstream 0.5kb downstream 500 false Chr05: 33802525-33803024 Glycine max
Glyma.05G144000 1.0kb upstream 1.0kb upstream 7318 true Chr05: 33795207-33802524 Glycine max
Glyma.05G144000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33795207-33796206 Glycine max
Glyma.05G144000 1.0kb downstream 1.0kb downstream 7318 true Chr05: 33796207-33803524 Glycine max
Glyma.05G144000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33802525-33803524 Glycine max
Glyma.05G144000 2.0kb upstream 2.0kb upstream 8318 true Chr05: 33794207-33802524 Glycine max
Glyma.05G144000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33794207-33796206 Glycine max
Glyma.05G144000 2.0kb downstream 2.0kb downstream 8318 true Chr05: 33796207-33804524 Glycine max
Glyma.05G144000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33802525-33804524 Glycine max
Glyma.05G144000 5.0kb upstream 5.0kb upstream 11318 true Chr05: 33791207-33802524 Glycine max
Glyma.05G144000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33791207-33796206 Glycine max
Glyma.05G144000 5.0kb downstream 5.0kb downstream 11318 true Chr05: 33796207-33807524 Glycine max
Glyma.05G144000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33802525-33807524 Glycine max
Glyma.05G144000 10.0kb upstream 10.0kb upstream 16318 true Chr05: 33786207-33802524 Glycine max
Glyma.05G144000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33786207-33796206 Glycine max
Glyma.05G144000 10.0kb downstream 10.0kb downstream 16318 true Chr05: 33796207-33812524 Glycine max
Glyma.05G144000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33802525-33812524 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306660 5265 Fabidae View MSA
124064746 5270 Rosid View MSA
123750268 5271 Pentapetalae View MSA
122792852 5272 Eudicot View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.05698 0.0 8.68299   Low
cufflinks 5.17905 0.0 14.0645    
cufflinks 3.91914 0.0 10.8204    
cufflinks 6.71216 0.0 18.002    
cufflinks 3.72586 0.0 10.3789    
cufflinks 7.44632 0.0 19.9128   High
cufflinks 8.41867 0.0 22.4736   High
cufflinks 4.09294 0.0 11.2988    
cufflinks 3.84279 0.0 10.6616    
cufflinks 2.888        
cufflinks 0.689       Low
cufflinks 3.117        
cufflinks 2.351        
cufflinks 2.849        
cufflinks 0.723       Low
cufflinks 4.751        
cufflinks 0.89       Low
cufflinks 5.003        
cufflinks 3.449        
cufflinks 5.551       High
cufflinks 1.119        
cufflinks 5.623       High
cufflinks 3.641        
cufflinks 1.132        
cufflinks 5.324       High
cufflinks 0.794       Low

0 Strain