Gene : Glyma.05G139000 G. max Wm82.a2.v1
Defline:  (1 of 26) PTHR10042 - EARLY GROWTH RESPONSE PROTEIN-RELATED Genomic Order:  1390
Name:  ? Glyma.05G139000 Secondary Identifier:  ? PAC:30527308
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G139000 0.5kb upstream 0.5kb upstream 5994 true Chr05: 33145106-33151099 Glycine max
Glyma.05G139000 0.5kb upstream 0.5kb upstream 500 false Chr05: 33150600-33151099 Glycine max
Glyma.05G139000 0.5kb downstream 0.5kb downstream 5994 true Chr05: 33144606-33150599 Glycine max
Glyma.05G139000 0.5kb downstream 0.5kb downstream 500 false Chr05: 33144606-33145105 Glycine max
Glyma.05G139000 1.0kb upstream 1.0kb upstream 6494 true Chr05: 33145106-33151599 Glycine max
Glyma.05G139000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33150600-33151599 Glycine max
Glyma.05G139000 1.0kb downstream 1.0kb downstream 6494 true Chr05: 33144106-33150599 Glycine max
Glyma.05G139000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33144106-33145105 Glycine max
Glyma.05G139000 2.0kb upstream 2.0kb upstream 7494 true Chr05: 33145106-33152599 Glycine max
Glyma.05G139000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33150600-33152599 Glycine max
Glyma.05G139000 2.0kb downstream 2.0kb downstream 7494 true Chr05: 33143106-33150599 Glycine max
Glyma.05G139000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33143106-33145105 Glycine max
Glyma.05G139000 5.0kb upstream 5.0kb upstream 10494 true Chr05: 33145106-33155599 Glycine max
Glyma.05G139000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33150600-33155599 Glycine max
Glyma.05G139000 5.0kb downstream 5.0kb downstream 10494 true Chr05: 33140106-33150599 Glycine max
Glyma.05G139000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33140106-33145105 Glycine max
Glyma.05G139000 10.0kb upstream 10.0kb upstream 15494 true Chr05: 33145106-33160599 Glycine max
Glyma.05G139000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33150600-33160599 Glycine max
Glyma.05G139000 10.0kb downstream 10.0kb downstream 15494 true Chr05: 33135106-33150599 Glycine max
Glyma.05G139000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33135106-33145105 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299108 5265 Fabidae View MSA
124072732 5270 Rosid View MSA
123749551 5271 Pentapetalae View MSA
122797803 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.792 0.0 126.898 High  
cufflinks 17.8208 0.0 69.5952    
cufflinks 5.03327 0.0 25.6788   Low
cufflinks 16.4237 0.0 69.3084    
cufflinks 15.9047 0.0 67.1788    
cufflinks 3.62929 0.0 19.7204   Low
cufflinks 13.6621 0.0 54.3354    
cufflinks 67.528 0.0 311.208 High High
cufflinks 24.0074 0.0 100.692 High  
cufflinks 2.579       High
cufflinks 0.847        
cufflinks 0.492        
cufflinks 0.422        
cufflinks 0.14       Low
cufflinks 0.893        
cufflinks 2.451       High
cufflinks 0.606        
cufflinks 0.211       Low
cufflinks 0.823        
cufflinks 2.846       High
cufflinks 1.098        
cufflinks 2.661       High
cufflinks 1.801        
cufflinks 1.56        
cufflinks 2.654       High
cufflinks 0.371        

0 Strain