Gene : Glyma.05G139600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31448:SF3 - IFA-BINDING PROTEIN Genomic Order:  1396
Name:  ? Glyma.05G139600 Secondary Identifier:  ? PAC:30525345
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G139600 0.5kb upstream 0.5kb upstream 4928 true Chr05: 33214615-33219542 Glycine max
Glyma.05G139600 0.5kb upstream 0.5kb upstream 500 false Chr05: 33219043-33219542 Glycine max
Glyma.05G139600 0.5kb downstream 0.5kb downstream 4928 true Chr05: 33214115-33219042 Glycine max
Glyma.05G139600 0.5kb downstream 0.5kb downstream 500 false Chr05: 33214115-33214614 Glycine max
Glyma.05G139600 1.0kb upstream 1.0kb upstream 5428 true Chr05: 33214615-33220042 Glycine max
Glyma.05G139600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33219043-33220042 Glycine max
Glyma.05G139600 1.0kb downstream 1.0kb downstream 5428 true Chr05: 33213615-33219042 Glycine max
Glyma.05G139600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33213615-33214614 Glycine max
Glyma.05G139600 2.0kb upstream 2.0kb upstream 6428 true Chr05: 33214615-33221042 Glycine max
Glyma.05G139600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33219043-33221042 Glycine max
Glyma.05G139600 2.0kb downstream 2.0kb downstream 6428 true Chr05: 33212615-33219042 Glycine max
Glyma.05G139600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33212615-33214614 Glycine max
Glyma.05G139600 5.0kb upstream 5.0kb upstream 9428 true Chr05: 33214615-33224042 Glycine max
Glyma.05G139600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33219043-33224042 Glycine max
Glyma.05G139600 5.0kb downstream 5.0kb downstream 9428 true Chr05: 33209615-33219042 Glycine max
Glyma.05G139600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33209615-33214614 Glycine max
Glyma.05G139600 10.0kb upstream 10.0kb upstream 14428 true Chr05: 33214615-33229042 Glycine max
Glyma.05G139600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33219043-33229042 Glycine max
Glyma.05G139600 10.0kb downstream 10.0kb downstream 14428 true Chr05: 33204615-33219042 Glycine max
Glyma.05G139600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33204615-33214614 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313978 5265 Fabidae View MSA
124070207 5270 Rosid View MSA
123753700 5271 Pentapetalae View MSA
122788125 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88854 0.0 5.45878   Low
cufflinks 5.79172 0.0 15.4658    
cufflinks 2.1573 0.0 6.09739   Low
cufflinks 10.8149 0.0 29.251   High
cufflinks 3.85049 0.0 10.4416    
cufflinks 4.5726 0.0 12.2925    
cufflinks 4.20938 0.0 11.364    
cufflinks 9.22498 0.0 24.7716   High
cufflinks 4.01449 0.0 10.8509    
cufflinks 16.985     High High
cufflinks 2.769       Low
cufflinks 5.868        
cufflinks 7.504     High  
cufflinks 5.93        
cufflinks 1.48       Low
cufflinks 7.341     High  
cufflinks 4.14        
cufflinks 6.833        
cufflinks 6.972        
cufflinks 4.648        
cufflinks 5.451        
cufflinks 5.52        
cufflinks 2.562       Low
cufflinks 3.003        
cufflinks 5.752        
cufflinks 4.811        

0 Strain