Gene : Glyma.05G140400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31636:SF50 - DELLA PROTEIN GAI-RELATED Genomic Order:  1404
Name:  ? Glyma.05G140400 Secondary Identifier:  ? PAC:30527035
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G140400 0.5kb upstream 0.5kb upstream 3438 true Chr05: 33322679-33326116 Glycine max
Glyma.05G140400 0.5kb upstream 0.5kb upstream 500 false Chr05: 33322679-33323178 Glycine max
Glyma.05G140400 0.5kb downstream 0.5kb downstream 3438 true Chr05: 33323179-33326616 Glycine max
Glyma.05G140400 0.5kb downstream 0.5kb downstream 500 false Chr05: 33326117-33326616 Glycine max
Glyma.05G140400 1.0kb upstream 1.0kb upstream 3938 true Chr05: 33322179-33326116 Glycine max
Glyma.05G140400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33322179-33323178 Glycine max
Glyma.05G140400 1.0kb downstream 1.0kb downstream 3938 true Chr05: 33323179-33327116 Glycine max
Glyma.05G140400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33326117-33327116 Glycine max
Glyma.05G140400 2.0kb upstream 2.0kb upstream 4938 true Chr05: 33321179-33326116 Glycine max
Glyma.05G140400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33321179-33323178 Glycine max
Glyma.05G140400 2.0kb downstream 2.0kb downstream 4938 true Chr05: 33323179-33328116 Glycine max
Glyma.05G140400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33326117-33328116 Glycine max
Glyma.05G140400 5.0kb upstream 5.0kb upstream 7938 true Chr05: 33318179-33326116 Glycine max
Glyma.05G140400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33318179-33323178 Glycine max
Glyma.05G140400 5.0kb downstream 5.0kb downstream 7938 true Chr05: 33323179-33331116 Glycine max
Glyma.05G140400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33326117-33331116 Glycine max
Glyma.05G140400 10.0kb upstream 10.0kb upstream 12938 true Chr05: 33313179-33326116 Glycine max
Glyma.05G140400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33313179-33323178 Glycine max
Glyma.05G140400 10.0kb downstream 10.0kb downstream 12938 true Chr05: 33323179-33336116 Glycine max
Glyma.05G140400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33326117-33336116 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314578 5265 Fabidae View MSA
124070083 5270 Rosid View MSA
123746513 5271 Pentapetalae View MSA
122796681 5272 Eudicot View MSA
122044707 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.6665 0.0 59.471    
cufflinks 19.8199 0.0 53.9008    
cufflinks 28.3513 0.0 79.3349 High High
cufflinks 17.1361 0.0 46.2586    
cufflinks 24.3732 0.0 67.8516 High  
cufflinks 18.4987 0.0 50.2414    
cufflinks 14.7504 0.0 39.6165   Low
cufflinks 25.8539 0.0 71.8874 High High
cufflinks 21.1693 0.0 57.968 High  
cufflinks 18.211     High  
cufflinks 10.962     High  
cufflinks 17.826     High  
cufflinks 14.339     High  
cufflinks 12.83     High  
cufflinks 6.8     High Low
cufflinks 26.458     High High
cufflinks 10.249     High Low
cufflinks 23.296     High  
cufflinks 16.236     High  
cufflinks 30.724     High High
cufflinks 15.392     High  
cufflinks 23.131     High  
cufflinks 18.01     High  
cufflinks 12.49     High  
cufflinks 27.864     High High
cufflinks 10.155     High Low

0 Strain