Gene : Glyma.05G140600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33270:SF5 - GB Genomic Order:  1406
Name:  ? Glyma.05G140600 Secondary Identifier:  ? PAC:30523613
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G140600 0.5kb upstream 0.5kb upstream 2232 true Chr05: 33351680-33353911 Glycine max
Glyma.05G140600 0.5kb upstream 0.5kb upstream 500 false Chr05: 33353412-33353911 Glycine max
Glyma.05G140600 0.5kb downstream 0.5kb downstream 2232 true Chr05: 33351180-33353411 Glycine max
Glyma.05G140600 0.5kb downstream 0.5kb downstream 500 false Chr05: 33351180-33351679 Glycine max
Glyma.05G140600 1.0kb upstream 1.0kb upstream 2732 true Chr05: 33351680-33354411 Glycine max
Glyma.05G140600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33353412-33354411 Glycine max
Glyma.05G140600 1.0kb downstream 1.0kb downstream 2732 true Chr05: 33350680-33353411 Glycine max
Glyma.05G140600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33350680-33351679 Glycine max
Glyma.05G140600 2.0kb upstream 2.0kb upstream 3732 true Chr05: 33351680-33355411 Glycine max
Glyma.05G140600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33353412-33355411 Glycine max
Glyma.05G140600 2.0kb downstream 2.0kb downstream 3732 true Chr05: 33349680-33353411 Glycine max
Glyma.05G140600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33349680-33351679 Glycine max
Glyma.05G140600 5.0kb upstream 5.0kb upstream 6732 true Chr05: 33351680-33358411 Glycine max
Glyma.05G140600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33353412-33358411 Glycine max
Glyma.05G140600 5.0kb downstream 5.0kb downstream 6732 true Chr05: 33346680-33353411 Glycine max
Glyma.05G140600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33346680-33351679 Glycine max
Glyma.05G140600 10.0kb upstream 10.0kb upstream 11732 true Chr05: 33351680-33363411 Glycine max
Glyma.05G140600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33353412-33363411 Glycine max
Glyma.05G140600 10.0kb downstream 10.0kb downstream 11732 true Chr05: 33341680-33353411 Glycine max
Glyma.05G140600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33341680-33351679 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304471 5265 Fabidae View MSA
124068577 5270 Rosid View MSA
123740302 5271 Pentapetalae View MSA
122797585 5272 Eudicot View MSA
122049795 5273 Angiosperm View MSA
121311591 5274 Embryophyte View MSA
123348867 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.1767 0.0 126.573 High  
cufflinks 21.826 0.0 58.8382 High Low
cufflinks 107.538 0.0 308.142 High High
cufflinks 43.6586 0.0 116.865 High  
cufflinks 41.7813 0.0 111.79 High  
cufflinks 31.2991 0.0 83.519 High  
cufflinks 41.4063 0.0 110.752 High  
cufflinks 56.9219 0.0 154.043 High  
cufflinks 26.1029 0.0 69.8655 High Low
cufflinks 16.662     High  
cufflinks 9.866     High  
cufflinks 37.515     High High
cufflinks 24.234     High High
cufflinks 33.61     High High
cufflinks 6.042     High Low
cufflinks 10.523     High  
cufflinks 18.229     High  
cufflinks 22.291     High  
cufflinks 11.799     High  
cufflinks 11.105     High  
cufflinks 10.274     High  
cufflinks 11.45     High  
cufflinks 13.986     High  
cufflinks 8.268     High Low
cufflinks 9.028     High  
cufflinks 10.115     High  

0 Strain