Gene : Glyma.05G140700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR34777:SF1 - VQ MOTIF-CONTAINING PROTEIN Genomic Order:  1407
Name:  ? Glyma.05G140700 Secondary Identifier:  ? PAC:30525747
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G140700 0.5kb upstream 0.5kb upstream 1321 true Chr05: 33359443-33360763 Glycine max
Glyma.05G140700 0.5kb upstream 0.5kb upstream 500 false Chr05: 33360264-33360763 Glycine max
Glyma.05G140700 0.5kb downstream 0.5kb downstream 1321 true Chr05: 33358943-33360263 Glycine max
Glyma.05G140700 0.5kb downstream 0.5kb downstream 500 false Chr05: 33358943-33359442 Glycine max
Glyma.05G140700 1.0kb upstream 1.0kb upstream 1821 true Chr05: 33359443-33361263 Glycine max
Glyma.05G140700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33360264-33361263 Glycine max
Glyma.05G140700 1.0kb downstream 1.0kb downstream 1821 true Chr05: 33358443-33360263 Glycine max
Glyma.05G140700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33358443-33359442 Glycine max
Glyma.05G140700 2.0kb upstream 2.0kb upstream 2821 true Chr05: 33359443-33362263 Glycine max
Glyma.05G140700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33360264-33362263 Glycine max
Glyma.05G140700 2.0kb downstream 2.0kb downstream 2821 true Chr05: 33357443-33360263 Glycine max
Glyma.05G140700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33357443-33359442 Glycine max
Glyma.05G140700 5.0kb upstream 5.0kb upstream 5821 true Chr05: 33359443-33365263 Glycine max
Glyma.05G140700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33360264-33365263 Glycine max
Glyma.05G140700 5.0kb downstream 5.0kb downstream 5821 true Chr05: 33354443-33360263 Glycine max
Glyma.05G140700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33354443-33359442 Glycine max
Glyma.05G140700 10.0kb upstream 10.0kb upstream 10821 true Chr05: 33359443-33370263 Glycine max
Glyma.05G140700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33360264-33370263 Glycine max
Glyma.05G140700 10.0kb downstream 10.0kb downstream 10821 true Chr05: 33349443-33360263 Glycine max
Glyma.05G140700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33349443-33359442 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026461 5273 Angiosperm View MSA
122298557 5265 Fabidae View MSA
124050155 5270 Rosid View MSA
123744131 5271 Pentapetalae View MSA
122770912 5272 Eudicot View MSA
121296343 5274 Embryophyte View MSA
123334522 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.10894 0.0 19.7694   High
cufflinks 0.544293 0.0 2.09621    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.401659 0.0 1.56844    
cufflinks 0.631545 0.0 2.41931    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.194538 0.0 0.779042 Low  
cufflinks 0.0995116 0.0 0.411921 Low Low
cufflinks 0.264        
cufflinks 0.326        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.948        
cufflinks 0.273        
cufflinks 0.116       Low
cufflinks 7.031       High
cufflinks 0.214        
cufflinks 0.072     Low Low
cufflinks 0.36        
cufflinks 1.591        
cufflinks 1.834        
cufflinks 3.031       High
cufflinks 0.534        
cufflinks 2.706       High
cufflinks 1.235        
cufflinks 1.304        

0 Strain