Gene : Glyma.05G141000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  1410
Name:  ? Glyma.05G141000 Secondary Identifier:  ? PAC:30524601
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5173 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PYRUVDEHYD-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G141000 0.5kb upstream 0.5kb upstream 4545 true Chr05: 33437932-33442476 Glycine max
Glyma.05G141000 0.5kb upstream 0.5kb upstream 500 false Chr05: 33441977-33442476 Glycine max
Glyma.05G141000 0.5kb downstream 0.5kb downstream 4545 true Chr05: 33437432-33441976 Glycine max
Glyma.05G141000 0.5kb downstream 0.5kb downstream 500 false Chr05: 33437432-33437931 Glycine max
Glyma.05G141000 1.0kb upstream 1.0kb upstream 5045 true Chr05: 33437932-33442976 Glycine max
Glyma.05G141000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33441977-33442976 Glycine max
Glyma.05G141000 1.0kb downstream 1.0kb downstream 5045 true Chr05: 33436932-33441976 Glycine max
Glyma.05G141000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33436932-33437931 Glycine max
Glyma.05G141000 2.0kb upstream 2.0kb upstream 6045 true Chr05: 33437932-33443976 Glycine max
Glyma.05G141000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33441977-33443976 Glycine max
Glyma.05G141000 2.0kb downstream 2.0kb downstream 6045 true Chr05: 33435932-33441976 Glycine max
Glyma.05G141000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33435932-33437931 Glycine max
Glyma.05G141000 5.0kb upstream 5.0kb upstream 9045 true Chr05: 33437932-33446976 Glycine max
Glyma.05G141000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33441977-33446976 Glycine max
Glyma.05G141000 5.0kb downstream 5.0kb downstream 9045 true Chr05: 33432932-33441976 Glycine max
Glyma.05G141000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33432932-33437931 Glycine max
Glyma.05G141000 10.0kb upstream 10.0kb upstream 14045 true Chr05: 33437932-33451976 Glycine max
Glyma.05G141000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33441977-33451976 Glycine max
Glyma.05G141000 10.0kb downstream 10.0kb downstream 14045 true Chr05: 33427932-33441976 Glycine max
Glyma.05G141000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33427932-33437931 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306477 5265 Fabidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8617 0.0 40.8224    
cufflinks 37.7209 0.0 142.716 High High
cufflinks 12.5367 0.0 43.0227    
cufflinks 8.74297 0.0 30.9668   Low
cufflinks 20.9011 0.0 72.36 High  
cufflinks 24.8269 0.0 87.3208 High  
cufflinks 19.4782 0.0 67.0233    
cufflinks 9.42884 0.0 33.0281    
cufflinks 9.27208 0.0 32.6037    
cufflinks 3.779        
cufflinks 0.716       Low
cufflinks 4.188        
cufflinks 6.009        
cufflinks 9.244     High High
cufflinks 0.178       Low
cufflinks 4.177        
cufflinks 1.395        
cufflinks 5.436        
cufflinks 14.245     High High
cufflinks 3.822        
cufflinks 0.944        
cufflinks 4.008        
cufflinks 5.337        
cufflinks 0.919        
cufflinks 4.01        
cufflinks 1.092        

0 Strain