Gene : Glyma.05G136000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13275 - YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1 Genomic Order:  1360
Name:  ? Glyma.05G136000 Secondary Identifier:  ? PAC:30524585
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G136000 0.5kb upstream 0.5kb upstream 6508 true Chr05: 32832536-32839043 Glycine max
Glyma.05G136000 0.5kb upstream 0.5kb upstream 500 false Chr05: 32838544-32839043 Glycine max
Glyma.05G136000 0.5kb downstream 0.5kb downstream 6508 true Chr05: 32832036-32838543 Glycine max
Glyma.05G136000 0.5kb downstream 0.5kb downstream 500 false Chr05: 32832036-32832535 Glycine max
Glyma.05G136000 1.0kb upstream 1.0kb upstream 7008 true Chr05: 32832536-32839543 Glycine max
Glyma.05G136000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32838544-32839543 Glycine max
Glyma.05G136000 1.0kb downstream 1.0kb downstream 7008 true Chr05: 32831536-32838543 Glycine max
Glyma.05G136000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32831536-32832535 Glycine max
Glyma.05G136000 2.0kb upstream 2.0kb upstream 8008 true Chr05: 32832536-32840543 Glycine max
Glyma.05G136000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32838544-32840543 Glycine max
Glyma.05G136000 2.0kb downstream 2.0kb downstream 8008 true Chr05: 32830536-32838543 Glycine max
Glyma.05G136000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32830536-32832535 Glycine max
Glyma.05G136000 5.0kb upstream 5.0kb upstream 11008 true Chr05: 32832536-32843543 Glycine max
Glyma.05G136000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32838544-32843543 Glycine max
Glyma.05G136000 5.0kb downstream 5.0kb downstream 11008 true Chr05: 32827536-32838543 Glycine max
Glyma.05G136000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32827536-32832535 Glycine max
Glyma.05G136000 10.0kb upstream 10.0kb upstream 16008 true Chr05: 32832536-32848543 Glycine max
Glyma.05G136000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32838544-32848543 Glycine max
Glyma.05G136000 10.0kb downstream 10.0kb downstream 16008 true Chr05: 32822536-32838543 Glycine max
Glyma.05G136000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32822536-32832535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302559 5265 Fabidae View MSA
124060580 5270 Rosid View MSA
123736798 5271 Pentapetalae View MSA
122788024 5272 Eudicot View MSA
122046393 5273 Angiosperm View MSA
121347831 5274 Embryophyte View MSA
123424205 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.43329 0.0 27.4659    
cufflinks 8.23575 0.0 30.163   High
cufflinks 5.20771 0.0 21.1571   Low
cufflinks 7.30176 0.0 27.4518    
cufflinks 5.77329 0.0 22.6811    
cufflinks 5.95809 0.0 23.2851    
cufflinks 8.24213 0.0 26.6577   High
cufflinks 5.32654 0.0 21.4714   Low
cufflinks 5.83256 0.0 23.0789    
cufflinks 0.866       Low
cufflinks 1.141        
cufflinks 1.173        
cufflinks 1.05        
cufflinks 1.305        
cufflinks 1.47       High
cufflinks 1.214        
cufflinks 0.924       Low
cufflinks 1.281        
cufflinks 1.423       High
cufflinks 1.32        
cufflinks 1.363        
cufflinks 1.279        
cufflinks 1.198        
cufflinks 1.059        
cufflinks 1.314        
cufflinks 0.905       Low

0 Strain