Gene : Glyma.05G137800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10209//PTHR10209:SF176 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN Genomic Order:  1378
Name:  ? Glyma.05G137800 Secondary Identifier:  ? PAC:30523725
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G137800 0.5kb upstream 0.5kb upstream 3762 true Chr05: 33038713-33042474 Glycine max
Glyma.05G137800 0.5kb upstream 0.5kb upstream 500 false Chr05: 33038713-33039212 Glycine max
Glyma.05G137800 0.5kb downstream 0.5kb downstream 3762 true Chr05: 33039213-33042974 Glycine max
Glyma.05G137800 0.5kb downstream 0.5kb downstream 500 false Chr05: 33042475-33042974 Glycine max
Glyma.05G137800 1.0kb upstream 1.0kb upstream 4262 true Chr05: 33038213-33042474 Glycine max
Glyma.05G137800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33038213-33039212 Glycine max
Glyma.05G137800 1.0kb downstream 1.0kb downstream 4262 true Chr05: 33039213-33043474 Glycine max
Glyma.05G137800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33042475-33043474 Glycine max
Glyma.05G137800 2.0kb upstream 2.0kb upstream 5262 true Chr05: 33037213-33042474 Glycine max
Glyma.05G137800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33037213-33039212 Glycine max
Glyma.05G137800 2.0kb downstream 2.0kb downstream 5262 true Chr05: 33039213-33044474 Glycine max
Glyma.05G137800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33042475-33044474 Glycine max
Glyma.05G137800 5.0kb upstream 5.0kb upstream 8262 true Chr05: 33034213-33042474 Glycine max
Glyma.05G137800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33034213-33039212 Glycine max
Glyma.05G137800 5.0kb downstream 5.0kb downstream 8262 true Chr05: 33039213-33047474 Glycine max
Glyma.05G137800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33042475-33047474 Glycine max
Glyma.05G137800 10.0kb upstream 10.0kb upstream 13262 true Chr05: 33029213-33042474 Glycine max
Glyma.05G137800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33029213-33039212 Glycine max
Glyma.05G137800 10.0kb downstream 10.0kb downstream 13262 true Chr05: 33039213-33052474 Glycine max
Glyma.05G137800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33042475-33052474 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312592 5265 Fabidae View MSA
124070161 5270 Rosid View MSA
123753331 5271 Pentapetalae View MSA
122797647 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0162602 0.0 0.0735372 Low Low
cufflinks 0.0320696 0.0 0.136979 Low  
cufflinks 0.345543 0.0 1.31367    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0278885 0.0 0.12042 Low  
cufflinks 0.303561 0.0 1.16288    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.12842 0.0 4.03361   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.653       High
cufflinks 3.253       High
cufflinks 0.298        
cufflinks 0.073     Low Low
cufflinks 0.017     Low Low
cufflinks 0.785        
cufflinks 0.274        
cufflinks 0.421        
cufflinks 0.181        
cufflinks 0.069     Low Low
cufflinks 0.125        
cufflinks 2.01        
cufflinks 0.096        
cufflinks 2.003        
cufflinks 1.452        
cufflinks 0.11        
cufflinks 5.437       High

0 Strain