Gene : Glyma.05G131400 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  1314
Name:  ? Glyma.05G131400 Secondary Identifier:  ? PAC:30526741
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-5686 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G131400 0.5kb upstream 0.5kb upstream 5372 true Chr05: 32432595-32437966 Glycine max
Glyma.05G131400 0.5kb upstream 0.5kb upstream 500 false Chr05: 32432595-32433094 Glycine max
Glyma.05G131400 0.5kb downstream 0.5kb downstream 5372 true Chr05: 32433095-32438466 Glycine max
Glyma.05G131400 0.5kb downstream 0.5kb downstream 500 false Chr05: 32437967-32438466 Glycine max
Glyma.05G131400 1.0kb upstream 1.0kb upstream 5872 true Chr05: 32432095-32437966 Glycine max
Glyma.05G131400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32432095-32433094 Glycine max
Glyma.05G131400 1.0kb downstream 1.0kb downstream 5872 true Chr05: 32433095-32438966 Glycine max
Glyma.05G131400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32437967-32438966 Glycine max
Glyma.05G131400 2.0kb upstream 2.0kb upstream 6872 true Chr05: 32431095-32437966 Glycine max
Glyma.05G131400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32431095-32433094 Glycine max
Glyma.05G131400 2.0kb downstream 2.0kb downstream 6872 true Chr05: 32433095-32439966 Glycine max
Glyma.05G131400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32437967-32439966 Glycine max
Glyma.05G131400 5.0kb upstream 5.0kb upstream 9872 true Chr05: 32428095-32437966 Glycine max
Glyma.05G131400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32428095-32433094 Glycine max
Glyma.05G131400 5.0kb downstream 5.0kb downstream 9872 true Chr05: 32433095-32442966 Glycine max
Glyma.05G131400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32437967-32442966 Glycine max
Glyma.05G131400 10.0kb upstream 10.0kb upstream 14872 true Chr05: 32423095-32437966 Glycine max
Glyma.05G131400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32423095-32433094 Glycine max
Glyma.05G131400 10.0kb downstream 10.0kb downstream 14872 true Chr05: 32433095-32447966 Glycine max
Glyma.05G131400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32437967-32447966 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312207 5265 Fabidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.52606 0.0 5.22828    
cufflinks 3.23856 0.0 10.0339    
cufflinks 2.06481 0.0 6.7753    
cufflinks 3.01819 0.0 9.43275    
cufflinks 2.30135 0.0 7.51014    
cufflinks 0.849373 0.0 3.05251   Low
cufflinks 2.38501 0.0 7.75507    
cufflinks 5.13773 0.0 14.9378   High
cufflinks 2.40346 0.0 7.77323    
cufflinks 0.887        
cufflinks 0.299        
cufflinks 1.196       High
cufflinks 0.882        
cufflinks 0.994        
cufflinks 0.084       Low
cufflinks 0.343        
cufflinks 0.635        
cufflinks 1.799       High
cufflinks 1.022       High
cufflinks 0.427        
cufflinks 0.28        
cufflinks 0.364        
cufflinks 0.343        
cufflinks 0.31        
cufflinks 0.328        
cufflinks 0.217       Low

0 Strain