Gene : Glyma.05G133400 G. max Wm82.a2.v1
Defline:  (1 of 7) PF13229 - Right handed beta helix region (Beta_helix) Genomic Order:  1334
Name:  ? Glyma.05G133400 Secondary Identifier:  ? PAC:30523663
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G133400 0.5kb upstream 0.5kb upstream 7037 true Chr05: 32638775-32645811 Glycine max
Glyma.05G133400 0.5kb upstream 0.5kb upstream 500 false Chr05: 32638775-32639274 Glycine max
Glyma.05G133400 0.5kb downstream 0.5kb downstream 7037 true Chr05: 32639275-32646311 Glycine max
Glyma.05G133400 0.5kb downstream 0.5kb downstream 500 false Chr05: 32645812-32646311 Glycine max
Glyma.05G133400 1.0kb upstream 1.0kb upstream 7537 true Chr05: 32638275-32645811 Glycine max
Glyma.05G133400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32638275-32639274 Glycine max
Glyma.05G133400 1.0kb downstream 1.0kb downstream 7537 true Chr05: 32639275-32646811 Glycine max
Glyma.05G133400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32645812-32646811 Glycine max
Glyma.05G133400 2.0kb upstream 2.0kb upstream 8537 true Chr05: 32637275-32645811 Glycine max
Glyma.05G133400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32637275-32639274 Glycine max
Glyma.05G133400 2.0kb downstream 2.0kb downstream 8537 true Chr05: 32639275-32647811 Glycine max
Glyma.05G133400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32645812-32647811 Glycine max
Glyma.05G133400 5.0kb upstream 5.0kb upstream 11537 true Chr05: 32634275-32645811 Glycine max
Glyma.05G133400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32634275-32639274 Glycine max
Glyma.05G133400 5.0kb downstream 5.0kb downstream 11537 true Chr05: 32639275-32650811 Glycine max
Glyma.05G133400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32645812-32650811 Glycine max
Glyma.05G133400 10.0kb upstream 10.0kb upstream 16537 true Chr05: 32629275-32645811 Glycine max
Glyma.05G133400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32629275-32639274 Glycine max
Glyma.05G133400 10.0kb downstream 10.0kb downstream 16537 true Chr05: 32639275-32655811 Glycine max
Glyma.05G133400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32645812-32655811 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312563 5265 Fabidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.228814 0.0 1.08214   Low
cufflinks 0.265567 0.0 1.30824    
cufflinks 0.261254 0.0 1.30577    
cufflinks 1.37297 0.0 6.89709    
cufflinks 3.69941 0.0 16.0573    
cufflinks 1.10463 0.0 5.87968    
cufflinks 0.344707 0.0 1.71238    
cufflinks 1.75471 0.0 9.66313    
cufflinks 15.0711 0.0 57.3402   High
cufflinks 0.041     Low  
cufflinks 0.005     Low Low
cufflinks 0.125        
cufflinks 1.965       High
cufflinks 1.404       High
cufflinks 0.322        
cufflinks 0.405        
cufflinks 0.031     Low  
cufflinks 0.314        
cufflinks 0.012     Low Low
cufflinks 0.252        
cufflinks 0.063        
cufflinks 0.306        
cufflinks 0.165        
cufflinks 0.032     Low  
cufflinks 0.406        
cufflinks 0.047     Low  

0 Strain