Gene : Glyma.05G133700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  1337
Name:  ? Glyma.05G133700 Secondary Identifier:  ? PAC:30524422
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G133700 0.5kb upstream 0.5kb upstream 3592 true Chr05: 32659503-32663094 Glycine max
Glyma.05G133700 0.5kb upstream 0.5kb upstream 500 false Chr05: 32659503-32660002 Glycine max
Glyma.05G133700 0.5kb downstream 0.5kb downstream 3592 true Chr05: 32660003-32663594 Glycine max
Glyma.05G133700 0.5kb downstream 0.5kb downstream 500 false Chr05: 32663095-32663594 Glycine max
Glyma.05G133700 1.0kb upstream 1.0kb upstream 4092 true Chr05: 32659003-32663094 Glycine max
Glyma.05G133700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32659003-32660002 Glycine max
Glyma.05G133700 1.0kb downstream 1.0kb downstream 4092 true Chr05: 32660003-32664094 Glycine max
Glyma.05G133700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32663095-32664094 Glycine max
Glyma.05G133700 2.0kb upstream 2.0kb upstream 5092 true Chr05: 32658003-32663094 Glycine max
Glyma.05G133700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32658003-32660002 Glycine max
Glyma.05G133700 2.0kb downstream 2.0kb downstream 5092 true Chr05: 32660003-32665094 Glycine max
Glyma.05G133700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32663095-32665094 Glycine max
Glyma.05G133700 5.0kb upstream 5.0kb upstream 8092 true Chr05: 32655003-32663094 Glycine max
Glyma.05G133700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32655003-32660002 Glycine max
Glyma.05G133700 5.0kb downstream 5.0kb downstream 8092 true Chr05: 32660003-32668094 Glycine max
Glyma.05G133700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32663095-32668094 Glycine max
Glyma.05G133700 10.0kb upstream 10.0kb upstream 13092 true Chr05: 32650003-32663094 Glycine max
Glyma.05G133700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32650003-32660002 Glycine max
Glyma.05G133700 10.0kb downstream 10.0kb downstream 13092 true Chr05: 32660003-32673094 Glycine max
Glyma.05G133700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32663095-32673094 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
122305015 5265 Fabidae View MSA
124066383 5270 Rosid View MSA
123740270 5271 Pentapetalae View MSA
122790310 5272 Eudicot View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.3354 0.0 78.7843 High High
cufflinks 14.428 0.0 38.796   Low
cufflinks 21.1222 0.0 56.3568 High  
cufflinks 22.0009 0.0 58.7034 High  
cufflinks 23.2268 0.0 62.0442 High  
cufflinks 26.5094 0.0 70.9685 High  
cufflinks 24.0685 0.0 64.3211 High  
cufflinks 19.0475 0.0 50.8423    
cufflinks 22.9694 0.0 61.3079 High  
cufflinks 8.983     High  
cufflinks 31.706     High High
cufflinks 10.358     High  
cufflinks 7.726     High  
cufflinks 5.901        
cufflinks 5.698     High  
cufflinks 7.798     High  
cufflinks 27.46     High High
cufflinks 4.34       Low
cufflinks 6.868        
cufflinks 8.49     High  
cufflinks 20.751     High  
cufflinks 10.205     High  
cufflinks 6.735        
cufflinks 53.557     High High
cufflinks 7.881     High  
cufflinks 21.817     High  

0 Strain