Gene : Glyma.05G154200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13020 - UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING Genomic Order:  1542
Name:  ? Glyma.05G154200 Secondary Identifier:  ? PAC:30526668
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G154200 0.5kb upstream 0.5kb upstream 10179 true Chr05: 34750449-34760627 Glycine max
Glyma.05G154200 0.5kb upstream 0.5kb upstream 500 false Chr05: 34750449-34750948 Glycine max
Glyma.05G154200 0.5kb downstream 0.5kb downstream 10179 true Chr05: 34750949-34761127 Glycine max
Glyma.05G154200 0.5kb downstream 0.5kb downstream 500 false Chr05: 34760628-34761127 Glycine max
Glyma.05G154200 1.0kb upstream 1.0kb upstream 10679 true Chr05: 34749949-34760627 Glycine max
Glyma.05G154200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34749949-34750948 Glycine max
Glyma.05G154200 1.0kb downstream 1.0kb downstream 10679 true Chr05: 34750949-34761627 Glycine max
Glyma.05G154200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34760628-34761627 Glycine max
Glyma.05G154200 2.0kb upstream 2.0kb upstream 11679 true Chr05: 34748949-34760627 Glycine max
Glyma.05G154200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34748949-34750948 Glycine max
Glyma.05G154200 2.0kb downstream 2.0kb downstream 11679 true Chr05: 34750949-34762627 Glycine max
Glyma.05G154200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34760628-34762627 Glycine max
Glyma.05G154200 5.0kb upstream 5.0kb upstream 14679 true Chr05: 34745949-34760627 Glycine max
Glyma.05G154200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34745949-34750948 Glycine max
Glyma.05G154200 5.0kb downstream 5.0kb downstream 14679 true Chr05: 34750949-34765627 Glycine max
Glyma.05G154200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34760628-34765627 Glycine max
Glyma.05G154200 10.0kb upstream 10.0kb upstream 19679 true Chr05: 34740949-34760627 Glycine max
Glyma.05G154200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34740949-34750948 Glycine max
Glyma.05G154200 10.0kb downstream 10.0kb downstream 19679 true Chr05: 34750949-34770627 Glycine max
Glyma.05G154200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34760628-34770627 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301757 5265 Fabidae View MSA
124061214 5270 Rosid View MSA
123738643 5271 Pentapetalae View MSA
122787724 5272 Eudicot View MSA
122045767 5273 Angiosperm View MSA
121347090 5274 Embryophyte View MSA
123424729 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.165 0.0 56.1804    
cufflinks 10.8893 0.0 55.934    
cufflinks 7.72456 0.0 40.924   Low
cufflinks 15.8492 0.0 76.5507   High
cufflinks 10.0505 0.0 49.0157    
cufflinks 9.30668 0.0 28.7803    
cufflinks 13.5411 0.0 65.0885    
cufflinks 11.886 0.0 35.8599    
cufflinks 11.7824 0.0 35.7126    
cufflinks 1.473       High
cufflinks 0.509       Low
cufflinks 1.26        
cufflinks 1.348        
cufflinks 1.259        
cufflinks 0.495       Low
cufflinks 1.094        
cufflinks 0.732        
cufflinks 1.542       High
cufflinks 1.211        
cufflinks 1.162        
cufflinks 0.652       Low
cufflinks 1.198        
cufflinks 1.12        
cufflinks 0.739        
cufflinks 1.046        
cufflinks 0.873        

0 Strain