Gene : Glyma.05G150300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33926:SF1 - PROTEIN TIC 22-LIKE, CHLOROPLASTIC Genomic Order:  1503
Name:  ? Glyma.05G150300 Secondary Identifier:  ? PAC:30525867
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G150300 0.5kb upstream 0.5kb upstream 5993 true Chr05: 34417293-34423285 Glycine max
Glyma.05G150300 0.5kb upstream 0.5kb upstream 500 false Chr05: 34417293-34417792 Glycine max
Glyma.05G150300 0.5kb downstream 0.5kb downstream 5993 true Chr05: 34417793-34423785 Glycine max
Glyma.05G150300 0.5kb downstream 0.5kb downstream 500 false Chr05: 34423286-34423785 Glycine max
Glyma.05G150300 1.0kb upstream 1.0kb upstream 6493 true Chr05: 34416793-34423285 Glycine max
Glyma.05G150300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34416793-34417792 Glycine max
Glyma.05G150300 1.0kb downstream 1.0kb downstream 6493 true Chr05: 34417793-34424285 Glycine max
Glyma.05G150300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34423286-34424285 Glycine max
Glyma.05G150300 2.0kb upstream 2.0kb upstream 7493 true Chr05: 34415793-34423285 Glycine max
Glyma.05G150300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34415793-34417792 Glycine max
Glyma.05G150300 2.0kb downstream 2.0kb downstream 7493 true Chr05: 34417793-34425285 Glycine max
Glyma.05G150300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34423286-34425285 Glycine max
Glyma.05G150300 5.0kb upstream 5.0kb upstream 10493 true Chr05: 34412793-34423285 Glycine max
Glyma.05G150300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34412793-34417792 Glycine max
Glyma.05G150300 5.0kb downstream 5.0kb downstream 10493 true Chr05: 34417793-34428285 Glycine max
Glyma.05G150300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34423286-34428285 Glycine max
Glyma.05G150300 10.0kb upstream 10.0kb upstream 15493 true Chr05: 34407793-34423285 Glycine max
Glyma.05G150300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34407793-34417792 Glycine max
Glyma.05G150300 10.0kb downstream 10.0kb downstream 15493 true Chr05: 34417793-34433285 Glycine max
Glyma.05G150300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34423286-34433285 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314318 5265 Fabidae View MSA
124069208 5270 Rosid View MSA
123743684 5271 Pentapetalae View MSA
122792985 5272 Eudicot View MSA
122046686 5273 Angiosperm View MSA
121348613 5274 Embryophyte View MSA
123424659 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3316 0.0 36.409    
cufflinks 11.8029 0.0 32.5528    
cufflinks 7.09615 0.0 20.6538    
cufflinks 8.07252 0.0 23.0783    
cufflinks 9.01768 0.0 25.4171    
cufflinks 5.202 0.0 15.749   Low
cufflinks 12.3847 0.0 33.9809    
cufflinks 12.0319 0.0 33.0995    
cufflinks 12.6073 0.0 34.5404    
cufflinks 0.666        
cufflinks 0.164       Low
cufflinks 1.277        
cufflinks 0.982        
cufflinks 1.137        
cufflinks 1.097        
cufflinks 1.08        
cufflinks 0.803        
cufflinks 1.221        
cufflinks 1.575       High
cufflinks 1.207        
cufflinks 0.31       Low
cufflinks 1.096        
cufflinks 1.155        
cufflinks 0.194       Low
cufflinks 1.181        
cufflinks 0.468        

0 Strain