Gene : Glyma.05G151200 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  1512
Name:  ? Glyma.05G151200 Secondary Identifier:  ? PAC:30524527
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6622 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G151200 0.5kb upstream 0.5kb upstream 13123 true Chr05: 34488826-34501948 Glycine max
Glyma.05G151200 0.5kb upstream 0.5kb upstream 500 false Chr05: 34488826-34489325 Glycine max
Glyma.05G151200 0.5kb downstream 0.5kb downstream 13123 true Chr05: 34489326-34502448 Glycine max
Glyma.05G151200 0.5kb downstream 0.5kb downstream 500 false Chr05: 34501949-34502448 Glycine max
Glyma.05G151200 1.0kb upstream 1.0kb upstream 13623 true Chr05: 34488326-34501948 Glycine max
Glyma.05G151200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34488326-34489325 Glycine max
Glyma.05G151200 1.0kb downstream 1.0kb downstream 13623 true Chr05: 34489326-34502948 Glycine max
Glyma.05G151200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34501949-34502948 Glycine max
Glyma.05G151200 2.0kb upstream 2.0kb upstream 14623 true Chr05: 34487326-34501948 Glycine max
Glyma.05G151200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34487326-34489325 Glycine max
Glyma.05G151200 2.0kb downstream 2.0kb downstream 14623 true Chr05: 34489326-34503948 Glycine max
Glyma.05G151200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34501949-34503948 Glycine max
Glyma.05G151200 5.0kb upstream 5.0kb upstream 17623 true Chr05: 34484326-34501948 Glycine max
Glyma.05G151200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34484326-34489325 Glycine max
Glyma.05G151200 5.0kb downstream 5.0kb downstream 17623 true Chr05: 34489326-34506948 Glycine max
Glyma.05G151200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34501949-34506948 Glycine max
Glyma.05G151200 10.0kb upstream 10.0kb upstream 22623 true Chr05: 34479326-34501948 Glycine max
Glyma.05G151200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34479326-34489325 Glycine max
Glyma.05G151200 10.0kb downstream 10.0kb downstream 22623 true Chr05: 34489326-34511948 Glycine max
Glyma.05G151200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34501949-34511948 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310113 5265 Fabidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.28167 0.0 6.23385    
cufflinks 6.80182 0.0 24.3585   High
cufflinks 1.98578 0.0 8.29706    
cufflinks 7.59275 0.0 26.675   High
cufflinks 1.4755 0.0 6.94095    
cufflinks 1.34253 0.0 6.43588    
cufflinks 1.31297 0.0 6.42003    
cufflinks 4.79156 0.0 18.3181    
cufflinks 0.982792 0.0 5.1484   Low
cufflinks 1.238        
cufflinks 0.098        
cufflinks 0.724        
cufflinks 0.23        
cufflinks 0.307        
cufflinks 0.094        
cufflinks 1.026        
cufflinks 0.031     Low Low
cufflinks 3.871       High
cufflinks 1.424        
cufflinks 0.792        
cufflinks 0.083        
cufflinks 0.893        
cufflinks 1.25        
cufflinks 0.031     Low Low
cufflinks 0.944        
cufflinks 0.042     Low Low

0 Strain