Gene : Glyma.05G148000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15601 - STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 Genomic Order:  1480
Name:  ? Glyma.05G148000 Secondary Identifier:  ? PAC:30525703
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G148000 0.5kb upstream 0.5kb upstream 2783 true Chr05: 34217841-34220623 Glycine max
Glyma.05G148000 0.5kb upstream 0.5kb upstream 500 false Chr05: 34220124-34220623 Glycine max
Glyma.05G148000 0.5kb downstream 0.5kb downstream 2783 true Chr05: 34217341-34220123 Glycine max
Glyma.05G148000 0.5kb downstream 0.5kb downstream 500 false Chr05: 34217341-34217840 Glycine max
Glyma.05G148000 1.0kb upstream 1.0kb upstream 3283 true Chr05: 34217841-34221123 Glycine max
Glyma.05G148000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34220124-34221123 Glycine max
Glyma.05G148000 1.0kb downstream 1.0kb downstream 3283 true Chr05: 34216841-34220123 Glycine max
Glyma.05G148000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34216841-34217840 Glycine max
Glyma.05G148000 2.0kb upstream 2.0kb upstream 4283 true Chr05: 34217841-34222123 Glycine max
Glyma.05G148000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34220124-34222123 Glycine max
Glyma.05G148000 2.0kb downstream 2.0kb downstream 4283 true Chr05: 34215841-34220123 Glycine max
Glyma.05G148000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34215841-34217840 Glycine max
Glyma.05G148000 5.0kb upstream 5.0kb upstream 7283 true Chr05: 34217841-34225123 Glycine max
Glyma.05G148000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34220124-34225123 Glycine max
Glyma.05G148000 5.0kb downstream 5.0kb downstream 7283 true Chr05: 34212841-34220123 Glycine max
Glyma.05G148000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34212841-34217840 Glycine max
Glyma.05G148000 10.0kb upstream 10.0kb upstream 12283 true Chr05: 34217841-34230123 Glycine max
Glyma.05G148000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34220124-34230123 Glycine max
Glyma.05G148000 10.0kb downstream 10.0kb downstream 12283 true Chr05: 34207841-34220123 Glycine max
Glyma.05G148000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34207841-34217840 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309793 5265 Fabidae View MSA
124071023 5270 Rosid View MSA
123745695 5271 Pentapetalae View MSA
122795442 5272 Eudicot View MSA
122050162 5273 Angiosperm View MSA
121345372 5274 Embryophyte View MSA
123428764 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.515 0.0 112.318 High  
cufflinks 23.2793 0.0 62.1099 High Low
cufflinks 52.6305 0.0 145.417 High  
cufflinks 38.2248 0.0 103.137 High  
cufflinks 52.9537 0.0 145.582 High  
cufflinks 66.0105 0.0 186.153 High  
cufflinks 108.022 0.0 322.802 High High
cufflinks 29.8669 0.0 79.8291 High Low
cufflinks 49.6421 0.0 136.106 High  
cufflinks 20.766     High Low
cufflinks 50.419     High High
cufflinks 38.603     High  
cufflinks 38.876     High  
cufflinks 43.543     High High
cufflinks 41.764     High  
cufflinks 25.977     High  
cufflinks 25.564     High  
cufflinks 42.364     High  
cufflinks 20.912     High Low
cufflinks 29.655     High  
cufflinks 30.696     High  
cufflinks 25.745     High  
cufflinks 21.293     High Low
cufflinks 45.744     High High
cufflinks 28.456     High  
cufflinks 32.032     High  

0 Strain