Gene : Glyma.05G146100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR18934:SF131 - RNA HELICASE, PUTATIVE-RELATED Genomic Order:  1461
Name:  ? Glyma.05G146100 Secondary Identifier:  ? PAC:30526709
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G146100 0.5kb upstream 0.5kb upstream 7616 true Chr05: 33977593-33985208 Glycine max
Glyma.05G146100 0.5kb upstream 0.5kb upstream 500 false Chr05: 33984709-33985208 Glycine max
Glyma.05G146100 0.5kb downstream 0.5kb downstream 7616 true Chr05: 33977093-33984708 Glycine max
Glyma.05G146100 0.5kb downstream 0.5kb downstream 500 false Chr05: 33977093-33977592 Glycine max
Glyma.05G146100 1.0kb upstream 1.0kb upstream 8116 true Chr05: 33977593-33985708 Glycine max
Glyma.05G146100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33984709-33985708 Glycine max
Glyma.05G146100 1.0kb downstream 1.0kb downstream 8116 true Chr05: 33976593-33984708 Glycine max
Glyma.05G146100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33976593-33977592 Glycine max
Glyma.05G146100 2.0kb upstream 2.0kb upstream 9116 true Chr05: 33977593-33986708 Glycine max
Glyma.05G146100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33984709-33986708 Glycine max
Glyma.05G146100 2.0kb downstream 2.0kb downstream 9116 true Chr05: 33975593-33984708 Glycine max
Glyma.05G146100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33975593-33977592 Glycine max
Glyma.05G146100 5.0kb upstream 5.0kb upstream 12116 true Chr05: 33977593-33989708 Glycine max
Glyma.05G146100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33984709-33989708 Glycine max
Glyma.05G146100 5.0kb downstream 5.0kb downstream 12116 true Chr05: 33972593-33984708 Glycine max
Glyma.05G146100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33972593-33977592 Glycine max
Glyma.05G146100 10.0kb upstream 10.0kb upstream 17116 true Chr05: 33977593-33994708 Glycine max
Glyma.05G146100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33984709-33994708 Glycine max
Glyma.05G146100 10.0kb downstream 10.0kb downstream 17116 true Chr05: 33967593-33984708 Glycine max
Glyma.05G146100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33967593-33977592 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306159 5265 Fabidae View MSA
124061640 5270 Rosid View MSA
123738238 5271 Pentapetalae View MSA
122791779 5272 Eudicot View MSA
122045278 5273 Angiosperm View MSA
121347414 5274 Embryophyte View MSA
123424380 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.78818 0.0 20.9035   High
cufflinks 4.01574 0.0 15.5576    
cufflinks 5.17635 0.0 21.2976    
cufflinks 3.41994 0.0 13.9261   Low
cufflinks 4.84428 0.0 18.1994    
cufflinks 6.23437 0.0 22.2112   High
cufflinks 3.30281 0.0 11.6217   Low
cufflinks 3.93412 0.0 15.2896    
cufflinks 4.31827 0.0 16.3971    
cufflinks 0.517       Low
cufflinks 0.871       High
cufflinks 0.676        
cufflinks 0.805        
cufflinks 0.719        
cufflinks 0.74        
cufflinks 0.597        
cufflinks 0.421       Low
cufflinks 0.521       Low
cufflinks 0.785        
cufflinks 0.583        
cufflinks 1.053       High
cufflinks 0.664        
cufflinks 0.492       Low
cufflinks 1.036       High
cufflinks 0.643        
cufflinks 0.696        

0 Strain