Gene : Glyma.05G165500 G. max Wm82.a2.v1
Defline:  (1 of 52) PTHR11353 - CHAPERONIN Genomic Order:  1655
Name:  ? Glyma.05G165500 Secondary Identifier:  ? PAC:30523659
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G165500 0.5kb upstream 0.5kb upstream 8053 true Chr05: 35606887-35614939 Glycine max
Glyma.05G165500 0.5kb upstream 0.5kb upstream 500 false Chr05: 35614440-35614939 Glycine max
Glyma.05G165500 0.5kb downstream 0.5kb downstream 8053 true Chr05: 35606387-35614439 Glycine max
Glyma.05G165500 0.5kb downstream 0.5kb downstream 500 false Chr05: 35606387-35606886 Glycine max
Glyma.05G165500 1.0kb upstream 1.0kb upstream 8553 true Chr05: 35606887-35615439 Glycine max
Glyma.05G165500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35614440-35615439 Glycine max
Glyma.05G165500 1.0kb downstream 1.0kb downstream 8553 true Chr05: 35605887-35614439 Glycine max
Glyma.05G165500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35605887-35606886 Glycine max
Glyma.05G165500 2.0kb upstream 2.0kb upstream 9553 true Chr05: 35606887-35616439 Glycine max
Glyma.05G165500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35614440-35616439 Glycine max
Glyma.05G165500 2.0kb downstream 2.0kb downstream 9553 true Chr05: 35604887-35614439 Glycine max
Glyma.05G165500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35604887-35606886 Glycine max
Glyma.05G165500 5.0kb upstream 5.0kb upstream 12553 true Chr05: 35606887-35619439 Glycine max
Glyma.05G165500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35614440-35619439 Glycine max
Glyma.05G165500 5.0kb downstream 5.0kb downstream 12553 true Chr05: 35601887-35614439 Glycine max
Glyma.05G165500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35601887-35606886 Glycine max
Glyma.05G165500 10.0kb upstream 10.0kb upstream 17553 true Chr05: 35606887-35624439 Glycine max
Glyma.05G165500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35614440-35624439 Glycine max
Glyma.05G165500 10.0kb downstream 10.0kb downstream 17553 true Chr05: 35596887-35614439 Glycine max
Glyma.05G165500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35596887-35606886 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308396 5265 Fabidae View MSA
124067300 5270 Rosid View MSA
123737840 5271 Pentapetalae View MSA
122792769 5272 Eudicot View MSA
122046551 5273 Angiosperm View MSA
121345633 5274 Embryophyte View MSA
123423902 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4419 0.0 49.4409   Low
cufflinks 37.4652 0.0 105.693 High  
cufflinks 13.6204 0.0 36.3378   Low
cufflinks 28.0077 0.0 76.8899 High  
cufflinks 49.8947 0.0 146.209 High High
cufflinks 30.7549 0.0 85.067 High  
cufflinks 32.522 0.0 90.3933 High  
cufflinks 31.8157 0.0 88.2604 High  
cufflinks 30.8431 0.0 85.3543 High  
cufflinks 10.214     High  
cufflinks 1.522       Low
cufflinks 6.914        
cufflinks 21.334     High High
cufflinks 29.411     High High
cufflinks 2.191       Low
cufflinks 6.258        
cufflinks 4.598        
cufflinks 8.367     High  
cufflinks 13.39     High High
cufflinks 4.578        
cufflinks 3.566        
cufflinks 5.281        
cufflinks 8.541     High  
cufflinks 2.367       Low
cufflinks 5.655        
cufflinks 4.989        

0 Strain