Gene : Glyma.05G165700 G. max Wm82.a2.v1
Defline:  (1 of 8) PF03004 - Plant transposase (Ptta/En/Spm family) (Transposase_24) Genomic Order:  1657
Name:  ? Glyma.05G165700 Secondary Identifier:  ? PAC:30526976
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G165700 0.5kb upstream 0.5kb upstream 8530 true Chr05: 35623150-35631679 Glycine max
Glyma.05G165700 0.5kb upstream 0.5kb upstream 500 false Chr05: 35631180-35631679 Glycine max
Glyma.05G165700 0.5kb downstream 0.5kb downstream 8530 true Chr05: 35622650-35631179 Glycine max
Glyma.05G165700 0.5kb downstream 0.5kb downstream 500 false Chr05: 35622650-35623149 Glycine max
Glyma.05G165700 1.0kb upstream 1.0kb upstream 9030 true Chr05: 35623150-35632179 Glycine max
Glyma.05G165700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35631180-35632179 Glycine max
Glyma.05G165700 1.0kb downstream 1.0kb downstream 9030 true Chr05: 35622150-35631179 Glycine max
Glyma.05G165700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35622150-35623149 Glycine max
Glyma.05G165700 2.0kb upstream 2.0kb upstream 10030 true Chr05: 35623150-35633179 Glycine max
Glyma.05G165700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35631180-35633179 Glycine max
Glyma.05G165700 2.0kb downstream 2.0kb downstream 10030 true Chr05: 35621150-35631179 Glycine max
Glyma.05G165700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35621150-35623149 Glycine max
Glyma.05G165700 5.0kb upstream 5.0kb upstream 13030 true Chr05: 35623150-35636179 Glycine max
Glyma.05G165700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35631180-35636179 Glycine max
Glyma.05G165700 5.0kb downstream 5.0kb downstream 13030 true Chr05: 35618150-35631179 Glycine max
Glyma.05G165700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35618150-35623149 Glycine max
Glyma.05G165700 10.0kb upstream 10.0kb upstream 18030 true Chr05: 35623150-35641179 Glycine max
Glyma.05G165700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35631180-35641179 Glycine max
Glyma.05G165700 10.0kb downstream 10.0kb downstream 18030 true Chr05: 35613150-35631179 Glycine max
Glyma.05G165700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35613150-35623149 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254234 5265 Fabidae View MSA
123996485 5270 Rosid View MSA
123753147 5271 Pentapetalae View MSA
122797842 5272 Eudicot View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.18213 0.0 0.695531 Low  
cufflinks 0.820371 0.0 2.87939   High
cufflinks 0.101279 0.0 0.396101 Low  
cufflinks 0.0879572 0.0 0.345931 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.120158 0.0 0.467486 Low  
cufflinks 0.0559838 0.0 0.223943 Low  
cufflinks 0.0716611 0.0 0.283962 Low  
cufflinks 0.0182247 0.0 0.0776711 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.207       High
cufflinks 0.047     Low  
cufflinks 0.02     Low  
cufflinks 0.005     Low Low
cufflinks 0.078        
cufflinks 0.077     Low  
cufflinks 0.009     Low Low
cufflinks 0.034     Low  
cufflinks 0.32       High
cufflinks 0.06     Low  
cufflinks 0.196       High
cufflinks 0.085     Low  
cufflinks 0.063     Low  
cufflinks 0.181       High
cufflinks 0.073     Low  
cufflinks 0.033     Low  

0 Strain