Gene : Glyma.05G166200 G. max Wm82.a2.v1
Defline:  (1 of 305) PF00646 - F-box domain (F-box) Genomic Order:  1662
Name:  ? Glyma.05G166200 Secondary Identifier:  ? PAC:30525228
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G166200 0.5kb upstream 0.5kb upstream 2191 true Chr05: 35674113-35676303 Glycine max
Glyma.05G166200 0.5kb upstream 0.5kb upstream 500 false Chr05: 35674113-35674612 Glycine max
Glyma.05G166200 0.5kb downstream 0.5kb downstream 2191 true Chr05: 35674613-35676803 Glycine max
Glyma.05G166200 0.5kb downstream 0.5kb downstream 500 false Chr05: 35676304-35676803 Glycine max
Glyma.05G166200 1.0kb upstream 1.0kb upstream 2691 true Chr05: 35673613-35676303 Glycine max
Glyma.05G166200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35673613-35674612 Glycine max
Glyma.05G166200 1.0kb downstream 1.0kb downstream 2691 true Chr05: 35674613-35677303 Glycine max
Glyma.05G166200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35676304-35677303 Glycine max
Glyma.05G166200 2.0kb upstream 2.0kb upstream 3691 true Chr05: 35672613-35676303 Glycine max
Glyma.05G166200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35672613-35674612 Glycine max
Glyma.05G166200 2.0kb downstream 2.0kb downstream 3691 true Chr05: 35674613-35678303 Glycine max
Glyma.05G166200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35676304-35678303 Glycine max
Glyma.05G166200 5.0kb upstream 5.0kb upstream 6691 true Chr05: 35669613-35676303 Glycine max
Glyma.05G166200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35669613-35674612 Glycine max
Glyma.05G166200 5.0kb downstream 5.0kb downstream 6691 true Chr05: 35674613-35681303 Glycine max
Glyma.05G166200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35676304-35681303 Glycine max
Glyma.05G166200 10.0kb upstream 10.0kb upstream 11691 true Chr05: 35664613-35676303 Glycine max
Glyma.05G166200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35664613-35674612 Glycine max
Glyma.05G166200 10.0kb downstream 10.0kb downstream 11691 true Chr05: 35674613-35686303 Glycine max
Glyma.05G166200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35676304-35686303 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315521 5265 Fabidae View MSA
124040737 5270 Rosid View MSA
123754486 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.80034 0.0 6.26371    
cufflinks 1.7043 0.0 5.95528   Low
cufflinks 3.43204 0.0 11.0431   High
cufflinks 2.26157 0.0 7.67609    
cufflinks 2.47085 0.0 8.29647    
cufflinks 1.78664 0.0 6.20738    
cufflinks 2.73112 0.0 9.07283    
cufflinks 1.79726 0.0 6.24641    
cufflinks 3.18274 0.0 10.3329   High
cufflinks 1.023        
cufflinks 0.667       Low
cufflinks 2.475       High
cufflinks 1.87       High
cufflinks 2.203       High
cufflinks 0.893        
cufflinks 0.921        
cufflinks 0.939        
cufflinks 2.051       High
cufflinks 1.265        
cufflinks 0.793        
cufflinks 0.424       Low
cufflinks 1.119        
cufflinks 1.158        
cufflinks 1.248        
cufflinks 1.113        
cufflinks 0.521       Low

0 Strain