Gene : Glyma.05G167200 G. max Wm82.a2.v1
Defline:  (1 of 2) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 Genomic Order:  1672
Name:  ? Glyma.05G167200 Secondary Identifier:  ? PAC:30524021
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G167200 0.5kb upstream 0.5kb upstream 21159 true Chr05: 35776711-35797869 Glycine max
Glyma.05G167200 0.5kb upstream 0.5kb upstream 500 false Chr05: 35776711-35777210 Glycine max
Glyma.05G167200 0.5kb downstream 0.5kb downstream 21159 true Chr05: 35777211-35798369 Glycine max
Glyma.05G167200 0.5kb downstream 0.5kb downstream 500 false Chr05: 35797870-35798369 Glycine max
Glyma.05G167200 1.0kb upstream 1.0kb upstream 21659 true Chr05: 35776211-35797869 Glycine max
Glyma.05G167200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35776211-35777210 Glycine max
Glyma.05G167200 1.0kb downstream 1.0kb downstream 21659 true Chr05: 35777211-35798869 Glycine max
Glyma.05G167200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35797870-35798869 Glycine max
Glyma.05G167200 2.0kb upstream 2.0kb upstream 22659 true Chr05: 35775211-35797869 Glycine max
Glyma.05G167200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35775211-35777210 Glycine max
Glyma.05G167200 2.0kb downstream 2.0kb downstream 22659 true Chr05: 35777211-35799869 Glycine max
Glyma.05G167200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35797870-35799869 Glycine max
Glyma.05G167200 5.0kb upstream 5.0kb upstream 25659 true Chr05: 35772211-35797869 Glycine max
Glyma.05G167200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35772211-35777210 Glycine max
Glyma.05G167200 5.0kb downstream 5.0kb downstream 25659 true Chr05: 35777211-35802869 Glycine max
Glyma.05G167200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35797870-35802869 Glycine max
Glyma.05G167200 10.0kb upstream 10.0kb upstream 30659 true Chr05: 35767211-35797869 Glycine max
Glyma.05G167200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35767211-35777210 Glycine max
Glyma.05G167200 10.0kb downstream 10.0kb downstream 30659 true Chr05: 35777211-35807869 Glycine max
Glyma.05G167200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35797870-35807869 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300937 5265 Fabidae View MSA
124067858 5270 Rosid View MSA
123739465 5271 Pentapetalae View MSA
122788693 5272 Eudicot View MSA
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.94197 0.0 21.4453    
cufflinks 6.81714 0.0 20.9315    
cufflinks 8.13731 0.0 29.9474    
cufflinks 7.62534 0.0 23.8211    
cufflinks 3.70889 0.0 11.0561    
cufflinks 1.19065 0.0 4.1754   Low
cufflinks 9.76882 0.0 36.6959    
cufflinks 5.27613 0.0 15.8549    
cufflinks 4.71532 0.0 16.1526    
cufflinks 1.279        
cufflinks 0.754       Low
cufflinks 2.119        
cufflinks 0.737       Low
cufflinks 0.781        
cufflinks 1.129        
cufflinks 2.339        
cufflinks 0.927        
cufflinks 2.486       High
cufflinks 2.321        
cufflinks 2.655       High
cufflinks 0.746       Low
cufflinks 2.646       High
cufflinks 2.124        
cufflinks 0.782        
cufflinks 2.502       High
cufflinks 0.595       Low

0 Strain