Gene : Glyma.05G164300 G. max Wm82.a2.v1
Defline:  (1 of 23) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  1643
Name:  ? Glyma.05G164300 Secondary Identifier:  ? PAC:30525132
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G164300 0.5kb upstream 0.5kb upstream 1842 true Chr05: 35518874-35520715 Glycine max
Glyma.05G164300 0.5kb upstream 0.5kb upstream 500 false Chr05: 35520216-35520715 Glycine max
Glyma.05G164300 0.5kb downstream 0.5kb downstream 1842 true Chr05: 35518374-35520215 Glycine max
Glyma.05G164300 0.5kb downstream 0.5kb downstream 500 false Chr05: 35518374-35518873 Glycine max
Glyma.05G164300 1.0kb upstream 1.0kb upstream 2342 true Chr05: 35518874-35521215 Glycine max
Glyma.05G164300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35520216-35521215 Glycine max
Glyma.05G164300 1.0kb downstream 1.0kb downstream 2342 true Chr05: 35517874-35520215 Glycine max
Glyma.05G164300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35517874-35518873 Glycine max
Glyma.05G164300 2.0kb upstream 2.0kb upstream 3342 true Chr05: 35518874-35522215 Glycine max
Glyma.05G164300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35520216-35522215 Glycine max
Glyma.05G164300 2.0kb downstream 2.0kb downstream 3342 true Chr05: 35516874-35520215 Glycine max
Glyma.05G164300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35516874-35518873 Glycine max
Glyma.05G164300 5.0kb upstream 5.0kb upstream 6342 true Chr05: 35518874-35525215 Glycine max
Glyma.05G164300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35520216-35525215 Glycine max
Glyma.05G164300 5.0kb downstream 5.0kb downstream 6342 true Chr05: 35513874-35520215 Glycine max
Glyma.05G164300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35513874-35518873 Glycine max
Glyma.05G164300 10.0kb upstream 10.0kb upstream 11342 true Chr05: 35518874-35530215 Glycine max
Glyma.05G164300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35520216-35530215 Glycine max
Glyma.05G164300 10.0kb downstream 10.0kb downstream 11342 true Chr05: 35508874-35520215 Glycine max
Glyma.05G164300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35508874-35518873 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310480 5265 Fabidae View MSA
124067384 5270 Rosid View MSA
123740214 5271 Pentapetalae View MSA
122788901 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.401954 0.0 3.54425    
cufflinks 0.820366 0.0 6.55221    
cufflinks 0.362333 0.0 3.26636   Low
cufflinks 0.559685 0.0 4.45165    
cufflinks 2.78751 0.0 11.2765    
cufflinks 2.68153 0.0 19.7448    
cufflinks 1.51365 0.0 12.9979    
cufflinks 0.390519 0.0 3.45787    
cufflinks 5.0799 0.0 17.3743   High
cufflinks 1.001        
cufflinks 1.495        
cufflinks 0.243       Low
cufflinks 4.384       High
cufflinks 1.173        
cufflinks 0.042     Low Low
cufflinks 0.596        
cufflinks 1.331        
cufflinks 0.912        
cufflinks 0.189       Low
cufflinks 0.744        
cufflinks 1.79        
cufflinks 0.495        
cufflinks 0.412        
cufflinks 1.04        
cufflinks 0.719        
cufflinks 1.673        

0 Strain