Gene : Glyma.05G161900 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1619
Name:  ? Glyma.05G161900 Secondary Identifier:  ? PAC:30527435
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G161900 0.5kb upstream 0.5kb upstream 1934 true Chr05: 35321254-35323187 Glycine max
Glyma.05G161900 0.5kb upstream 0.5kb upstream 500 false Chr05: 35321254-35321753 Glycine max
Glyma.05G161900 0.5kb downstream 0.5kb downstream 1934 true Chr05: 35321754-35323687 Glycine max
Glyma.05G161900 0.5kb downstream 0.5kb downstream 500 false Chr05: 35323188-35323687 Glycine max
Glyma.05G161900 1.0kb upstream 1.0kb upstream 2434 true Chr05: 35320754-35323187 Glycine max
Glyma.05G161900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35320754-35321753 Glycine max
Glyma.05G161900 1.0kb downstream 1.0kb downstream 2434 true Chr05: 35321754-35324187 Glycine max
Glyma.05G161900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35323188-35324187 Glycine max
Glyma.05G161900 2.0kb upstream 2.0kb upstream 3434 true Chr05: 35319754-35323187 Glycine max
Glyma.05G161900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35319754-35321753 Glycine max
Glyma.05G161900 2.0kb downstream 2.0kb downstream 3434 true Chr05: 35321754-35325187 Glycine max
Glyma.05G161900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35323188-35325187 Glycine max
Glyma.05G161900 5.0kb upstream 5.0kb upstream 6434 true Chr05: 35316754-35323187 Glycine max
Glyma.05G161900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35316754-35321753 Glycine max
Glyma.05G161900 5.0kb downstream 5.0kb downstream 6434 true Chr05: 35321754-35328187 Glycine max
Glyma.05G161900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35323188-35328187 Glycine max
Glyma.05G161900 10.0kb upstream 10.0kb upstream 11434 true Chr05: 35311754-35323187 Glycine max
Glyma.05G161900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35311754-35321753 Glycine max
Glyma.05G161900 10.0kb downstream 10.0kb downstream 11434 true Chr05: 35321754-35333187 Glycine max
Glyma.05G161900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35323188-35333187 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314337 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.54996 0.0 8.43459    
cufflinks 0.825868 0.0 3.01606    
cufflinks 0.165225 0.0 0.649018 Low Low
cufflinks 9.29924 0.0 25.9173    
cufflinks 12.969 0.0 35.2382    
cufflinks 0.211019 0.0 0.820991 Low Low
cufflinks 0.127562 0.0 0.505605 Low Low
cufflinks 73.8024 0.0 211.976 High High
cufflinks 11.635 0.0 31.829    
cufflinks 59.892     High High
cufflinks 1.34        
cufflinks 0.098     Low  
cufflinks 0.047     Low  
cufflinks 0.166        
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 27.615     High High
cufflinks 0.062     Low  
cufflinks 0.33        
cufflinks 0.024     Low Low
cufflinks 3.866        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low Low
cufflinks 1.998        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.786        

0 Strain