Gene : Glyma.05G162400 G. max Wm82.a2.v1
Genomic Order:  1624 Name:  ? Glyma.05G162400
Secondary Identifier:  ? PAC:30523734
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G162400 0.5kb upstream 0.5kb upstream 2109 true Chr05: 35356723-35358831 Glycine max
Glyma.05G162400 0.5kb upstream 0.5kb upstream 500 false Chr05: 35356723-35357222 Glycine max
Glyma.05G162400 0.5kb downstream 0.5kb downstream 2109 true Chr05: 35357223-35359331 Glycine max
Glyma.05G162400 0.5kb downstream 0.5kb downstream 500 false Chr05: 35358832-35359331 Glycine max
Glyma.05G162400 1.0kb upstream 1.0kb upstream 2609 true Chr05: 35356223-35358831 Glycine max
Glyma.05G162400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35356223-35357222 Glycine max
Glyma.05G162400 1.0kb downstream 1.0kb downstream 2609 true Chr05: 35357223-35359831 Glycine max
Glyma.05G162400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35358832-35359831 Glycine max
Glyma.05G162400 2.0kb upstream 2.0kb upstream 3609 true Chr05: 35355223-35358831 Glycine max
Glyma.05G162400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35355223-35357222 Glycine max
Glyma.05G162400 2.0kb downstream 2.0kb downstream 3609 true Chr05: 35357223-35360831 Glycine max
Glyma.05G162400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35358832-35360831 Glycine max
Glyma.05G162400 5.0kb upstream 5.0kb upstream 6609 true Chr05: 35352223-35358831 Glycine max
Glyma.05G162400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35352223-35357222 Glycine max
Glyma.05G162400 5.0kb downstream 5.0kb downstream 6609 true Chr05: 35357223-35363831 Glycine max
Glyma.05G162400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35358832-35363831 Glycine max
Glyma.05G162400 10.0kb upstream 10.0kb upstream 11609 true Chr05: 35347223-35358831 Glycine max
Glyma.05G162400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35347223-35357222 Glycine max
Glyma.05G162400 10.0kb downstream 10.0kb downstream 11609 true Chr05: 35357223-35368831 Glycine max
Glyma.05G162400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35358832-35368831 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309583 5265 Fabidae View MSA
124073274 5270 Rosid View MSA
123746985 5271 Pentapetalae View MSA
122772073 5272 Eudicot View MSA
122048544 5273 Angiosperm View MSA
121311015 5274 Embryophyte View MSA
123348373 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.62614 0.0 30.3664    
cufflinks 1.35983 0.0 8.92746   Low
cufflinks 2.05261 0.0 12.36   Low
cufflinks 8.29141 0.0 35.6461    
cufflinks 15.7233 0.0 55.1686   High
cufflinks 3.69906 0.0 19.7015    
cufflinks 7.51876 0.0 32.8768    
cufflinks 3.52396 0.0 18.8468    
cufflinks 4.17       High
cufflinks 1.026        
cufflinks 1.007        
cufflinks 2.37       High
cufflinks 4.084       High
cufflinks 0.205       Low
cufflinks 0.479        
cufflinks 0.367        
cufflinks 1.962        
cufflinks 1.674        
cufflinks 0.147       Low
cufflinks 0.893        
cufflinks 0.218       Low
cufflinks 0.41        
cufflinks 1.681        
cufflinks 0.163       Low
cufflinks 1.143        

0 Strain