Gene : Glyma.05G158900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31314:SF10 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  1589
Name:  ? Glyma.05G158900 Secondary Identifier:  ? PAC:30524978
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G158900 0.5kb upstream 0.5kb upstream 6976 true Chr05: 35108183-35115158 Glycine max
Glyma.05G158900 0.5kb upstream 0.5kb upstream 500 false Chr05: 35108183-35108682 Glycine max
Glyma.05G158900 0.5kb downstream 0.5kb downstream 6976 true Chr05: 35108683-35115658 Glycine max
Glyma.05G158900 0.5kb downstream 0.5kb downstream 500 false Chr05: 35115159-35115658 Glycine max
Glyma.05G158900 1.0kb upstream 1.0kb upstream 7476 true Chr05: 35107683-35115158 Glycine max
Glyma.05G158900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35107683-35108682 Glycine max
Glyma.05G158900 1.0kb downstream 1.0kb downstream 7476 true Chr05: 35108683-35116158 Glycine max
Glyma.05G158900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35115159-35116158 Glycine max
Glyma.05G158900 2.0kb upstream 2.0kb upstream 8476 true Chr05: 35106683-35115158 Glycine max
Glyma.05G158900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35106683-35108682 Glycine max
Glyma.05G158900 2.0kb downstream 2.0kb downstream 8476 true Chr05: 35108683-35117158 Glycine max
Glyma.05G158900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35115159-35117158 Glycine max
Glyma.05G158900 5.0kb upstream 5.0kb upstream 11476 true Chr05: 35103683-35115158 Glycine max
Glyma.05G158900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35103683-35108682 Glycine max
Glyma.05G158900 5.0kb downstream 5.0kb downstream 11476 true Chr05: 35108683-35120158 Glycine max
Glyma.05G158900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35115159-35120158 Glycine max
Glyma.05G158900 10.0kb upstream 10.0kb upstream 16476 true Chr05: 35098683-35115158 Glycine max
Glyma.05G158900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35098683-35108682 Glycine max
Glyma.05G158900 10.0kb downstream 10.0kb downstream 16476 true Chr05: 35108683-35125158 Glycine max
Glyma.05G158900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35115159-35125158 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307090 5265 Fabidae View MSA
124071619 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.109881 0.0 0.429916 Low Low
cufflinks 5.79706 0.0 21.9562   High
cufflinks 0.748308 0.0 3.27024    
cufflinks 0.232305 0.0 1.16652    
cufflinks 0.528919 0.0 3.14014    
cufflinks 1.34288 0.0 6.789    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.377253 0.0 1.79424    
cufflinks 1.14741 0.0 4.38869    
cufflinks 0.026     Low Low
cufflinks 0.269        
cufflinks 0.198        
cufflinks 0.207        
cufflinks 0.009     Low Low
cufflinks 0.059        
cufflinks 0.213        
cufflinks 0.248        
cufflinks 0.1     Low  
cufflinks 1.357       High
cufflinks 0.15        
cufflinks 0.094        
cufflinks 0.142        
cufflinks 0.107        
cufflinks 0.813       High
cufflinks 0.155        
cufflinks 0.2        

0 Strain