Gene : Glyma.05G159000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33671:SF3 - F28N24.8 PROTEIN Genomic Order:  1590
Name:  ? Glyma.05G159000 Secondary Identifier:  ? PAC:30526107
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G159000 0.5kb upstream 0.5kb upstream 4514 true Chr05: 35116372-35120885 Glycine max
Glyma.05G159000 0.5kb upstream 0.5kb upstream 500 false Chr05: 35120386-35120885 Glycine max
Glyma.05G159000 0.5kb downstream 0.5kb downstream 4514 true Chr05: 35115872-35120385 Glycine max
Glyma.05G159000 0.5kb downstream 0.5kb downstream 500 false Chr05: 35115872-35116371 Glycine max
Glyma.05G159000 1.0kb upstream 1.0kb upstream 5014 true Chr05: 35116372-35121385 Glycine max
Glyma.05G159000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35120386-35121385 Glycine max
Glyma.05G159000 1.0kb downstream 1.0kb downstream 5014 true Chr05: 35115372-35120385 Glycine max
Glyma.05G159000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35115372-35116371 Glycine max
Glyma.05G159000 2.0kb upstream 2.0kb upstream 6014 true Chr05: 35116372-35122385 Glycine max
Glyma.05G159000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35120386-35122385 Glycine max
Glyma.05G159000 2.0kb downstream 2.0kb downstream 6014 true Chr05: 35114372-35120385 Glycine max
Glyma.05G159000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35114372-35116371 Glycine max
Glyma.05G159000 5.0kb upstream 5.0kb upstream 9014 true Chr05: 35116372-35125385 Glycine max
Glyma.05G159000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35120386-35125385 Glycine max
Glyma.05G159000 5.0kb downstream 5.0kb downstream 9014 true Chr05: 35111372-35120385 Glycine max
Glyma.05G159000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35111372-35116371 Glycine max
Glyma.05G159000 10.0kb upstream 10.0kb upstream 14014 true Chr05: 35116372-35130385 Glycine max
Glyma.05G159000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35120386-35130385 Glycine max
Glyma.05G159000 10.0kb downstream 10.0kb downstream 14014 true Chr05: 35106372-35120385 Glycine max
Glyma.05G159000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35106372-35116371 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254366 5265 Fabidae View MSA
124068455 5270 Rosid View MSA
123745252 5271 Pentapetalae View MSA
122793682 5272 Eudicot View MSA
122048199 5273 Angiosperm View MSA
121349828 5274 Embryophyte View MSA
123381462 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.408096 0.0 2.55176    
cufflinks 0.32652 0.0 2.05051    
cufflinks 0.104951 0.0 0.924509 Low  
cufflinks 1.72428 0.0 10.3558   High
cufflinks 0.239098 0.0 1.58311    
cufflinks 0.0303103 0.0 0.125607 Low Low
cufflinks 0.568803 0.0 3.28724    
cufflinks 3.99321 0.0 21.552   High
cufflinks 0.51769 0.0 3.01378    
cufflinks 0.178       High
cufflinks 0.018     Low  
cufflinks 0.045     Low  
cufflinks 0.041     Low  
cufflinks 0.01     Low Low
cufflinks 0.009     Low Low
cufflinks 0.07     Low  
cufflinks 0.122       High
cufflinks 0.101     Low High
cufflinks 0.046     Low  
cufflinks 0.078     Low  
cufflinks 0.022     Low  
cufflinks 0.065     Low  
cufflinks 0.048     Low  
cufflinks 0.016     Low Low
cufflinks 0.072     Low  
cufflinks 0.025     Low  

0 Strain