Gene : Glyma.05G175200 G. max Wm82.a2.v1
Defline:  (1 of 19) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  1752
Name:  ? Glyma.05G175200 Secondary Identifier:  ? PAC:30526604
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G175200 0.5kb upstream 0.5kb upstream 2013 true Chr05: 36404078-36406090 Glycine max
Glyma.05G175200 0.5kb upstream 0.5kb upstream 500 false Chr05: 36405591-36406090 Glycine max
Glyma.05G175200 0.5kb downstream 0.5kb downstream 2013 true Chr05: 36403578-36405590 Glycine max
Glyma.05G175200 0.5kb downstream 0.5kb downstream 500 false Chr05: 36403578-36404077 Glycine max
Glyma.05G175200 1.0kb upstream 1.0kb upstream 2513 true Chr05: 36404078-36406590 Glycine max
Glyma.05G175200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36405591-36406590 Glycine max
Glyma.05G175200 1.0kb downstream 1.0kb downstream 2513 true Chr05: 36403078-36405590 Glycine max
Glyma.05G175200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36403078-36404077 Glycine max
Glyma.05G175200 2.0kb upstream 2.0kb upstream 3513 true Chr05: 36404078-36407590 Glycine max
Glyma.05G175200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36405591-36407590 Glycine max
Glyma.05G175200 2.0kb downstream 2.0kb downstream 3513 true Chr05: 36402078-36405590 Glycine max
Glyma.05G175200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36402078-36404077 Glycine max
Glyma.05G175200 5.0kb upstream 5.0kb upstream 6513 true Chr05: 36404078-36410590 Glycine max
Glyma.05G175200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36405591-36410590 Glycine max
Glyma.05G175200 5.0kb downstream 5.0kb downstream 6513 true Chr05: 36399078-36405590 Glycine max
Glyma.05G175200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36399078-36404077 Glycine max
Glyma.05G175200 10.0kb upstream 10.0kb upstream 11513 true Chr05: 36404078-36415590 Glycine max
Glyma.05G175200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36405591-36415590 Glycine max
Glyma.05G175200 10.0kb downstream 10.0kb downstream 11513 true Chr05: 36394078-36405590 Glycine max
Glyma.05G175200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36394078-36404077 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310217 5265 Fabidae View MSA
124068431 5270 Rosid View MSA
123751387 5271 Pentapetalae View MSA
122796767 5272 Eudicot View MSA
122047033 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.316916 0.0 1.2342   High
cufflinks 0.0489844 0.0 0.209924 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.125948 0.0 0.508084 Low  
cufflinks 0.205557 0.0 0.814332 Low  
cufflinks 0.145        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.454       High
cufflinks 0.16        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  

0 Strain