Gene : Glyma.05G176600 G. max Wm82.a2.v1
Genomic Order:  1766 Name:  ? Glyma.05G176600
Secondary Identifier:  ? PAC:30526039
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G176600 0.5kb upstream 0.5kb upstream 4789 true Chr05: 36546468-36551256 Glycine max
Glyma.05G176600 0.5kb upstream 0.5kb upstream 500 false Chr05: 36546468-36546967 Glycine max
Glyma.05G176600 0.5kb downstream 0.5kb downstream 4789 true Chr05: 36546968-36551756 Glycine max
Glyma.05G176600 0.5kb downstream 0.5kb downstream 500 false Chr05: 36551257-36551756 Glycine max
Glyma.05G176600 1.0kb upstream 1.0kb upstream 5289 true Chr05: 36545968-36551256 Glycine max
Glyma.05G176600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36545968-36546967 Glycine max
Glyma.05G176600 1.0kb downstream 1.0kb downstream 5289 true Chr05: 36546968-36552256 Glycine max
Glyma.05G176600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36551257-36552256 Glycine max
Glyma.05G176600 2.0kb upstream 2.0kb upstream 6289 true Chr05: 36544968-36551256 Glycine max
Glyma.05G176600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36544968-36546967 Glycine max
Glyma.05G176600 2.0kb downstream 2.0kb downstream 6289 true Chr05: 36546968-36553256 Glycine max
Glyma.05G176600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36551257-36553256 Glycine max
Glyma.05G176600 5.0kb upstream 5.0kb upstream 9289 true Chr05: 36541968-36551256 Glycine max
Glyma.05G176600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36541968-36546967 Glycine max
Glyma.05G176600 5.0kb downstream 5.0kb downstream 9289 true Chr05: 36546968-36556256 Glycine max
Glyma.05G176600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36551257-36556256 Glycine max
Glyma.05G176600 10.0kb upstream 10.0kb upstream 14289 true Chr05: 36536968-36551256 Glycine max
Glyma.05G176600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36536968-36546967 Glycine max
Glyma.05G176600 10.0kb downstream 10.0kb downstream 14289 true Chr05: 36546968-36561256 Glycine max
Glyma.05G176600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36551257-36561256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026188 5273 Angiosperm View MSA
122299545 5265 Fabidae View MSA
124050471 5270 Rosid View MSA
123745810 5271 Pentapetalae View MSA
122794841 5272 Eudicot View MSA
121345010 5274 Embryophyte View MSA
123380138 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.07964 0.0 17.469    
cufflinks 6.08961 0.0 17.547    
cufflinks 2.81293 0.0 9.0343   Low
cufflinks 6.57514 0.0 18.755    
cufflinks 5.62079 0.0 16.2559    
cufflinks 4.24956 0.0 12.7908    
cufflinks 5.46676 0.0 15.8888    
cufflinks 7.15999 0.0 20.244   High
cufflinks 5.08556 0.0 14.9552    
cufflinks 2.443        
cufflinks 0.383       Low
cufflinks 1.64        
cufflinks 2.269        
cufflinks 2.577        
cufflinks 1.053        
cufflinks 2.254        
cufflinks 0.748       Low
cufflinks 2.317        
cufflinks 2.522        
cufflinks 2.067        
cufflinks 0.657       Low
cufflinks 2.447        
cufflinks 2.817       High
cufflinks 0.617       Low
cufflinks 1.914        
cufflinks 0.596       Low

0 Strain