Gene : Glyma.05G178100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24006:SF469 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 Genomic Order:  1781
Name:  ? Glyma.05G178100 Secondary Identifier:  ? PAC:30525780
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G178100 0.5kb upstream 0.5kb upstream 10138 true Chr05: 36629346-36639483 Glycine max
Glyma.05G178100 0.5kb upstream 0.5kb upstream 500 false Chr05: 36629346-36629845 Glycine max
Glyma.05G178100 0.5kb downstream 0.5kb downstream 10138 true Chr05: 36629846-36639983 Glycine max
Glyma.05G178100 0.5kb downstream 0.5kb downstream 500 false Chr05: 36639484-36639983 Glycine max
Glyma.05G178100 1.0kb upstream 1.0kb upstream 10638 true Chr05: 36628846-36639483 Glycine max
Glyma.05G178100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36628846-36629845 Glycine max
Glyma.05G178100 1.0kb downstream 1.0kb downstream 10638 true Chr05: 36629846-36640483 Glycine max
Glyma.05G178100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36639484-36640483 Glycine max
Glyma.05G178100 2.0kb upstream 2.0kb upstream 11638 true Chr05: 36627846-36639483 Glycine max
Glyma.05G178100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36627846-36629845 Glycine max
Glyma.05G178100 2.0kb downstream 2.0kb downstream 11638 true Chr05: 36629846-36641483 Glycine max
Glyma.05G178100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36639484-36641483 Glycine max
Glyma.05G178100 5.0kb upstream 5.0kb upstream 14638 true Chr05: 36624846-36639483 Glycine max
Glyma.05G178100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36624846-36629845 Glycine max
Glyma.05G178100 5.0kb downstream 5.0kb downstream 14638 true Chr05: 36629846-36644483 Glycine max
Glyma.05G178100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36639484-36644483 Glycine max
Glyma.05G178100 10.0kb upstream 10.0kb upstream 19638 true Chr05: 36619846-36639483 Glycine max
Glyma.05G178100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36619846-36629845 Glycine max
Glyma.05G178100 10.0kb downstream 10.0kb downstream 19638 true Chr05: 36629846-36649483 Glycine max
Glyma.05G178100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36639484-36649483 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306839 5265 Fabidae View MSA
124061352 5270 Rosid View MSA
123749945 5271 Pentapetalae View MSA
122787648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4699 0.0 45.4584   High
cufflinks 7.17244 0.0 28.7322   Low
cufflinks 11.7458 0.0 42.986    
cufflinks 8.15834 0.0 31.4403    
cufflinks 9.41936 0.0 35.582    
cufflinks 14.1727 0.0 51.2333   High
cufflinks 7.92317 0.0 31.2655    
cufflinks 8.84167 0.0 33.5839    
cufflinks 10.7977 0.0 40.2093    
cufflinks 0.618       Low
cufflinks 1.171       High
cufflinks 1.161        
cufflinks 0.969        
cufflinks 0.858        
cufflinks 0.96        
cufflinks 0.75        
cufflinks 0.722       Low
cufflinks 1.082        
cufflinks 0.843        
cufflinks 0.771        
cufflinks 1.237       High
cufflinks 0.779        
cufflinks 0.791        
cufflinks 1.377       High
cufflinks 0.83        
cufflinks 1.199       High

0 Strain