Gene : Glyma.05G174300 G. max Wm82.a2.v1
Defline:  (1 of 17) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) Genomic Order:  1743
Name:  ? Glyma.05G174300 Secondary Identifier:  ? PAC:30527105
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G174300 0.5kb upstream 0.5kb upstream 2225 true Chr05: 36330357-36332581 Glycine max
Glyma.05G174300 0.5kb upstream 0.5kb upstream 500 false Chr05: 36330357-36330856 Glycine max
Glyma.05G174300 0.5kb downstream 0.5kb downstream 2225 true Chr05: 36330857-36333081 Glycine max
Glyma.05G174300 0.5kb downstream 0.5kb downstream 500 false Chr05: 36332582-36333081 Glycine max
Glyma.05G174300 1.0kb upstream 1.0kb upstream 2725 true Chr05: 36329857-36332581 Glycine max
Glyma.05G174300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36329857-36330856 Glycine max
Glyma.05G174300 1.0kb downstream 1.0kb downstream 2725 true Chr05: 36330857-36333581 Glycine max
Glyma.05G174300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36332582-36333581 Glycine max
Glyma.05G174300 2.0kb upstream 2.0kb upstream 3725 true Chr05: 36328857-36332581 Glycine max
Glyma.05G174300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36328857-36330856 Glycine max
Glyma.05G174300 2.0kb downstream 2.0kb downstream 3725 true Chr05: 36330857-36334581 Glycine max
Glyma.05G174300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36332582-36334581 Glycine max
Glyma.05G174300 5.0kb upstream 5.0kb upstream 6725 true Chr05: 36325857-36332581 Glycine max
Glyma.05G174300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36325857-36330856 Glycine max
Glyma.05G174300 5.0kb downstream 5.0kb downstream 6725 true Chr05: 36330857-36337581 Glycine max
Glyma.05G174300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36332582-36337581 Glycine max
Glyma.05G174300 10.0kb upstream 10.0kb upstream 11725 true Chr05: 36320857-36332581 Glycine max
Glyma.05G174300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36320857-36330856 Glycine max
Glyma.05G174300 10.0kb downstream 10.0kb downstream 11725 true Chr05: 36330857-36342581 Glycine max
Glyma.05G174300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36332582-36342581 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303755 5265 Fabidae View MSA
124060612 5270 Rosid View MSA
123738498 5271 Pentapetalae View MSA
122786721 5272 Eudicot View MSA
122041994 5273 Angiosperm View MSA
121347271 5274 Embryophyte View MSA
123424793 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.3299 0.0 220.608 High  
cufflinks 84.0562 0.0 231.425 High  
cufflinks 54.2585 0.0 145.456 High Low
cufflinks 55.4724 0.0 148.936 High Low
cufflinks 167.183 0.0 503.815 High High
cufflinks 135.832 0.0 395.518 High  
cufflinks 106.773 0.0 302.287 High  
cufflinks 110.921 0.0 314.272 High  
cufflinks 106.352 0.0 300.502 High  
cufflinks 41.997     High  
cufflinks 12.988     High Low
cufflinks 30.952     High  
cufflinks 107.481     High High
cufflinks 145.887     High High
cufflinks 11.605     High Low
cufflinks 30.518     High  
cufflinks 31.572     High  
cufflinks 31.799     High  
cufflinks 50.063     High  
cufflinks 19.343     High  
cufflinks 20.385     High  
cufflinks 24.442     High  
cufflinks 37.102     High  
cufflinks 16.512     High  
cufflinks 24.827     High  
cufflinks 25.714     High  

0 Strain